RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 TERB2Q8NHR7 220 aa12.19□□□□□ -0.46
PTPRU-208ENST00000493601 A0A1W2PS18 150 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 ZNF182P17025 639 aaPredicted RBP12.18□□□□□ -0.46
PTPRU-208ENST00000493601 NPPCP23582 126 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 UCP1P25874 307 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 ETV6P41212 452 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 TAS2R19P59542 299 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 DEFB131AP59861 70 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 CTF1Q16619 201 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 SCGB2B2Q4G0G5 96 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 TMEM229BQ8NBD8 167 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 OR4D10Q8NGI6 311 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 C11orf45Q8TAV5 145 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 NARS2Q96I59 477 aaKnown RBP12.18□□□□□ -0.46
PTPRU-208ENST00000493601 METTL26Q96S19 204 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 RABAC1Q9UI14 185 aa12.18□□□□□ -0.46
PTPRU-208ENST00000493601 CLN5O75503 358 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 RAB3DO95716 219 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 CD74P04233 296 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 RPL5P46777 297 aaKnown RBP12.17□□□□□ -0.46
PTPRU-208ENST00000493601 TMEM187Q14656 261 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 RBMS2Q15434 407 aaKnown RBP12.17□□□□□ -0.46
PTPRU-208ENST00000493601 SP6Q3SY56 376 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 LEMD1Q68G75 181 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 FAM219AQ8IW50 185 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 STHQ8IWL8 128 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 LILRB2Q8N423 598 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 OR4X1Q8NH49 305 aa12.17□□□□□ -0.46
PTPRU-208ENST00000493601 IFNA4P05014 189 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 NANOS2P60321 138 aaKnown RBP12.16□□□□□ -0.46
PTPRU-208ENST00000493601 SPCS3P61009 180 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 BSXQ3C1V8 233 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 LGALS9CQ6DKI2 356 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 STEAP1BQ6NZ63 245 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 FAM24BQ8N5W8 94 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 MARCH1Q8TCQ1 289 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 ABHD1Q96SE0 405 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 NAA50Q9GZZ1 169 aaKnown RBP12.16□□□□□ -0.46
PTPRU-208ENST00000493601 TMEM222Q9H0R3 208 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 FNDC4Q9H6D8 234 aaPredicted RBP12.16□□□□□ -0.46
PTPRU-208ENST00000493601 FBXL17Q9UF56 701 aa12.16□□□□□ -0.46
PTPRU-208ENST00000493601 C14orf166Q9Y224 244 aaKnown RBP12.16□□□□□ -0.46
PTPRU-208ENST00000493601 TRAV30A0A087WSZ9 112 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 A0A0G2JRQ6 117 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 RPS10-NUDT3A0A1W2PQS6 291 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 CRYBB3P26998 211 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 HTR2BP41595 481 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 P2RY1P47900 373 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 SSBP1Q04837 148 aaKnown RBP12.15□□□□□ -0.46
PTPRU-208ENST00000493601 MEF2DQ14814 521 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 AARDQ4LEZ3 155 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 TMEM41BQ5BJD5 291 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 STXBP6Q8NFX7 210 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 GRAMD2BQ96HH9 432 aa12.15□□□□□ -0.46
PTPRU-208ENST00000493601 MRPL36Q9P0J6 103 aaKnown RBP12.15□□□□□ -0.46
PTPRU-208ENST00000493601 FRAS1Q86XX4 4008 aa12.15□□□□□ -0.47
PTPRU-208ENST00000493601 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
PTPRU-208ENST00000493601 CDS2O95674 445 aa12.14□□□□□ -0.47
PTPRU-208ENST00000493601 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
PTPRU-208ENST00000493601 EIF2B2P49770 351 aaKnown RBP12.14□□□□□ -0.47
PTPRU-208ENST00000493601 MRPS10P82664 201 aaKnown RBP12.14□□□□□ -0.47
PTPRU-208ENST00000493601 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
PTPRU-208ENST00000493601 OR52E5Q8NH55 327 aa12.14□□□□□ -0.47
PTPRU-208ENST00000493601 RBPMSQ93062 196 aaKnown RBP12.14□□□□□ -0.47
PTPRU-208ENST00000493601 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.14□□□□□ -0.47
PTPRU-208ENST00000493601 TEX13DA0A0J9YY54 714 aaPredicted RBP12.13□□□□□ -0.47
PTPRU-208ENST00000493601 K7EQG2 157 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 RGS5O15539 181 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 IGKV1-17P01599 117 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 SMIM18P0DKX4 95 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 SPP1P10451 314 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 SURF2Q15527 256 aaPredicted RBP12.13□□□□□ -0.47
PTPRU-208ENST00000493601 GPR107Q5VW38 600 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 MORN3Q6PF18 240 aaPredicted RBP12.13□□□□□ -0.47
PTPRU-208ENST00000493601 Q6ZRM9 215 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 NAA60Q9H7X0 242 aa12.13□□□□□ -0.47
PTPRU-208ENST00000493601 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
PTPRU-208ENST00000493601 DEFB4AO15263 64 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 SLC25A4P12235 298 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 TCTAP57738 103 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 DHODHQ02127 395 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 MLANAQ16655 118 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 TIGITQ495A1 244 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 FAAP20Q6NZ36 180 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 TRPT1Q86TN4 253 aaKnown RBP12.12□□□□□ -0.47
PTPRU-208ENST00000493601 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 RNASEH2CQ8TDP1 164 aaKnown RBP12.12□□□□□ -0.47
PTPRU-208ENST00000493601 C2CD4CQ8TF44 421 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 KMT2AQ03164 3969 aa12.12□□□□□ -0.47
PTPRU-208ENST00000493601 HELTA6NFD8 242 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 DISC1C4P0D8 188 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 DEDDO75618 318 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 ZNF688P0C7X2 276 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 RND2P52198 227 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 C2orf83Q53S99 150 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 Q8NAQ8 132 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
PTPRU-208ENST00000493601 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms