RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 CLUHP3Q96NS8 147 aa11.33□□□□□ -0.6
TFE3-204ENST00000493583 IGHV3-72A0A0B4J1Y9 119 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 MRPL49Q13405 166 aaKnown RBP11.32□□□□□ -0.6
TFE3-204ENST00000493583 TIGITQ495A1 244 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 CORO2AQ92828 525 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 BORCS7Q96B45 105 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 SLC35D1Q9NTN3 355 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 MUC21A0A0G2JKD1 596 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 MUC21A0A140T8X8 626 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 SS18L1O75177 396 aaPredicted RBP11.32□□□□□ -0.6
TFE3-204ENST00000493583 HSBP1O75506 76 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 ZNF718Q3SXZ3 478 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 MORN2Q502X0 79 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 MUC21Q5SSG8 566 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 SLC35E4Q6ICL7 350 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 FER1L6-AS2Q96M78 137 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 KLF13Q9Y2Y9 288 aaPredicted RBP11.32□□□□□ -0.6
TFE3-204ENST00000493583 ARL2-SNX15V9GYD0 113 aa11.32□□□□□ -0.6
TFE3-204ENST00000493583 FXYD7P58549 80 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 PEAR1Q5VY43 1037 aaPredicted RBP11.31□□□□□ -0.6
TFE3-204ENST00000493583 TPPP3Q9BW30 176 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
TFE3-204ENST00000493583 ARHGAP32A7KAX9 2087 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 hDV102S1A0JD36 115 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 RHOBP62745 196 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 SPATA12Q7Z6I5 190 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
TFE3-204ENST00000493583 IGKV1D-17A0A075B6S4 117 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 SAA2-SAA4A0A096LPE2 208 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 SRRM4A7MD48 611 aaKnown RBP11.31□□□□□ -0.6
TFE3-204ENST00000493583 E7EUB6 86 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 TMPRSS2O15393 492 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 CIDEAO60543 219 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 SAP30O75446 220 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 FTH1P19P0C7X4 201 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 CECR9P0C854 216 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 SAA2P0DJI9 122 aaPredicted RBP11.31□□□□□ -0.6
TFE3-204ENST00000493583 AMMECR1LQ6DCA0 310 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 LINC00470Q9BZP3 86 aa11.31□□□□□ -0.6
TFE3-204ENST00000493583 MALRD1Q5VYJ5 2156 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 M0R2Z0 102 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 IGLC2P0DOY2 106 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 IGLC3P0DOY3 106 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 YPEL3P61236 119 aaPredicted RBP11.3□□□□□ -0.6
TFE3-204ENST00000493583 LINC00596Q86U02 117 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 Q8N976 141 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 TSKUQ8WUA8 353 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 CSTL1Q9H114 145 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 SPG11Q96JI7 2443 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 ORM2P19652 201 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 SELENOVP59797 346 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 PAFAH1B2P68402 229 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 ZNF503Q96F45 646 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 CCL13Q99616 98 aa11.3□□□□□ -0.6
TFE3-204ENST00000493583 J3QR06 171 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 K7EM74 188 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 APCSP02743 223 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 OPRK1P41145 380 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 VDAC2P45880 294 aaPredicted RBP11.29□□□□□ -0.6
TFE3-204ENST00000493583 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
TFE3-204ENST00000493583 FAM214BQ7L5A3 538 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 OR8B2Q96RD0 313 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 ZNF71Q9NQZ8 489 aaPredicted RBP11.29□□□□□ -0.6
TFE3-204ENST00000493583 IGHV2OR16-5A0A0B4J2B6 119 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 NPIPB11E5RHQ5 1161 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 MOSP00540 346 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 TSPOP30536 169 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 DIAPH2-AS1Q14236 149 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 CT45A1Q5HYN5 189 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 NIT1Q86X76 327 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 FAM216BQ8N7L0 139 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 CT45A3Q8NHU0 189 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
TFE3-204ENST00000493583 GNG7O60262 68 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 Q8IYB0 196 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 TCTEX1D1Q8N7M0 179 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
TFE3-204ENST00000493583 J3QW42 95 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 ZNF324O75467 553 aaPredicted RBP11.28□□□□□ -0.6
TFE3-204ENST00000493583 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
TFE3-204ENST00000493583 SMIM21Q3B7S5 101 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 HCP5Q6MZN7 132 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 C15orf65H3BRN8 121 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 M0R1B8 84 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 ISLRO14498 428 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 FOXE3Q13461 319 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 EBLN2Q6P2I7 272 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 KLHDC1Q8N7A1 406 aa11.28□□□□□ -0.6
TFE3-204ENST00000493583 C9orf106Q8NAJ2 232 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms