RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 NOXA1Q86UR1 476 aa8.87□□□□□ -0.99
CTSA-209ENST00000493522 OR4D5Q8NGN0 318 aa8.87□□□□□ -0.99
CTSA-209ENST00000493522 CIB3Q96Q77 187 aaPredicted RBP8.87□□□□□ -0.99
CTSA-209ENST00000493522 GSKIPQ9P0R6 139 aa8.87□□□□□ -0.99
CTSA-209ENST00000493522 PAIP2BQ9ULR5 123 aaKnown RBP8.87□□□□□ -0.99
CTSA-209ENST00000493522 RPS10-NUDT3A0A1W2PQS6 291 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 WI2-2373I1.2A0A1W2PRP0 233 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 SNRPGP15A8MWD9 76 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 SSSCA1O60232 199 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 SAP30O75446 220 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 OR2C1O95371 312 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 CLEC3BP05452 202 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 POLR2GP62487 172 aaKnown RBP eCLIP8.86□□□□□ -0.99
CTSA-209ENST00000493522 EGFEM1PQ0D2K5 195 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 TATDN3Q17R31 274 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 PVRIGQ6DKI7 326 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 GSG1LQ6UXU4 331 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 BSCL2Q96G97 398 aaPredicted RBP8.86□□□□□ -0.99
CTSA-209ENST00000493522 B9D2Q9BPU9 175 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 ELOVL1Q9BW60 279 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 GAR1Q9NY12 217 aaKnown RBP8.86□□□□□ -0.99
CTSA-209ENST00000493522 U3KQ87 197 aa8.86□□□□□ -0.99
CTSA-209ENST00000493522 IGHV3-35A0A0C4DH35 117 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 F8W735 103 aaPredicted RBP8.85□□□□□ -0.99
CTSA-209ENST00000493522 H3BP45 60 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 GOSR2O14653 212 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 SSNA1O43805 119 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 GNG7O60262 68 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 IFNA4P05014 189 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 KLF5Q13887 457 aaPredicted RBP8.85□□□□□ -0.99
CTSA-209ENST00000493522 SPSB3Q6PJ21 355 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 RNASEH2CQ8TDP1 164 aaKnown RBP8.85□□□□□ -0.99
CTSA-209ENST00000493522 TMEM170AQ8WVE7 144 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 OR4C12Q96R67 309 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 ATP6V0BQ99437 205 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 FNDC4Q9H6D8 234 aaPredicted RBP8.85□□□□□ -0.99
CTSA-209ENST00000493522 PEMTQ9UBM1 199 aa8.85□□□□□ -0.99
CTSA-209ENST00000493522 ZNF320A2RRD8 509 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 NUPL2O15504 423 aaKnown RBP8.84□□□□□ -0.99
CTSA-209ENST00000493522 LY86O95711 162 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 FCGR2BP31994 310 aaPredicted RBP8.84□□□□□ -0.99
CTSA-209ENST00000493522 NPBWR1P48145 328 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 S100A10P60903 97 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 RAB11AP62491 216 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 RPP30P78346 268 aaKnown RBP8.84□□□□□ -0.99
CTSA-209ENST00000493522 ID3Q02535 119 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 RGS21Q2M5E4 152 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 FAM106AQ4KMX7 169 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 SPANXN5Q5MJ07 72 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 ETFRF1Q6IPR1 90 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 SLC16A13Q7RTY0 426 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 C2orf50Q96LR7 162 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 TXN2Q99757 166 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 CHRDL1Q9BU40 450 aa8.84□□□□□ -0.99
CTSA-209ENST00000493522 RCL1Q9Y2P8 373 aaKnown RBP8.84□□□□□ -0.99
CTSA-209ENST00000493522 LSM5Q9Y4Y9 91 aaKnown RBP8.84□□□□□ -0.99
CTSA-209ENST00000493522 SORL1Q92673 2214 aa8.83□□□□□ -1
CTSA-209ENST00000493522 C15orf62A8K5M9 175 aa8.83□□□□□ -1
CTSA-209ENST00000493522 L7N2F9 121 aa8.83□□□□□ -1
CTSA-209ENST00000493522 SCGB2A1O75556 95 aa8.83□□□□□ -1
CTSA-209ENST00000493522 MBPP02686 304 aaPredicted RBP8.83□□□□□ -1
CTSA-209ENST00000493522 SLC25A4P12235 298 aa8.83□□□□□ -1
CTSA-209ENST00000493522 ADMP35318 185 aa8.83□□□□□ -1
CTSA-209ENST00000493522 RND2P52198 227 aa8.83□□□□□ -1
CTSA-209ENST00000493522 ATP5IP56385 69 aaPredicted RBP8.83□□□□□ -1
CTSA-209ENST00000493522 VAMP2P63027 116 aa8.83□□□□□ -1
CTSA-209ENST00000493522 RELQ04864 619 aaPredicted RBP8.83□□□□□ -1
CTSA-209ENST00000493522 HAPLN4Q86UW8 402 aa8.83□□□□□ -1
CTSA-209ENST00000493522 GPHB5Q86YW7 130 aa8.83□□□□□ -1
CTSA-209ENST00000493522 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
CTSA-209ENST00000493522 ACY3Q96HD9 319 aa8.83□□□□□ -1
CTSA-209ENST00000493522 SLC35E1Q96K37 410 aa8.83□□□□□ -1
CTSA-209ENST00000493522 PSENENQ9NZ42 101 aa8.83□□□□□ -1
CTSA-209ENST00000493522 MRPL36Q9P0J6 103 aaKnown RBP8.83□□□□□ -1
CTSA-209ENST00000493522 ZMAT5Q9UDW3 170 aaKnown RBP8.83□□□□□ -1
CTSA-209ENST00000493522 STRAPQ9Y3F4 350 aaKnown RBP8.83□□□□□ -1
CTSA-209ENST00000493522 ALG5Q9Y673 324 aa8.83□□□□□ -1
CTSA-209ENST00000493522 RYR2Q92736 4967 aa8.82□□□□□ -1
CTSA-209ENST00000493522 C7orf66A4D0T2 115 aa8.82□□□□□ -1
CTSA-209ENST00000493522 A8MWP6 167 aa8.82□□□□□ -1
CTSA-209ENST00000493522 K7EPK0 472 aa8.82□□□□□ -1
CTSA-209ENST00000493522 LGALS9O00182 355 aa8.82□□□□□ -1
CTSA-209ENST00000493522 CLN5O75503 358 aa8.82□□□□□ -1
CTSA-209ENST00000493522 SIX6O95475 246 aa8.82□□□□□ -1
CTSA-209ENST00000493522 CTSGP08311 255 aa8.82□□□□□ -1
CTSA-209ENST00000493522 INSL3P51460 131 aa8.82□□□□□ -1
CTSA-209ENST00000493522 MLANAQ16655 118 aa8.82□□□□□ -1
CTSA-209ENST00000493522 UNQ9165/PRO28630Q6UXU0 137 aa8.82□□□□□ -1
CTSA-209ENST00000493522 OR4X1Q8NH49 305 aa8.82□□□□□ -1
CTSA-209ENST00000493522 DYNLRB2Q8TF09 96 aa8.82□□□□□ -1
CTSA-209ENST00000493522 RAB40CQ96S21 281 aa8.82□□□□□ -1
CTSA-209ENST00000493522 C20orf24Q9BUV8 137 aa8.82□□□□□ -1
CTSA-209ENST00000493522 ZNF436Q9C0F3 470 aaPredicted RBP8.82□□□□□ -1
CTSA-209ENST00000493522 MGAT4CQ9UBM8 478 aa8.82□□□□□ -1
CTSA-209ENST00000493522 DYNC2H1Q8NCM8 4307 aaKnown RBP8.81□□□□□ -1
CTSA-209ENST00000493522 DNAH7Q8WXX0 4024 aa8.81□□□□□ -1
CTSA-209ENST00000493522 IGHV3OR16-8A0A075B7F1 116 aa8.81□□□□□ -1
CTSA-209ENST00000493522 TMEM213A2RRL7 107 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms