RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PVRIGQ6DKI7 326 aa12.72□□□□□ -0.37
SGMS1-204ENST00000492601 Q6ZRM9 215 aa12.72□□□□□ -0.37
SGMS1-204ENST00000492601 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
SGMS1-204ENST00000492601 C14orf166Q9Y224 244 aaKnown RBP12.72□□□□□ -0.37
SGMS1-204ENST00000492601 DFFBO76075 338 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 OPRK1P41145 380 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 ALDH3B2P48448 385 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.37
SGMS1-204ENST00000492601 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
SGMS1-204ENST00000492601 PAFAH1B2P68402 229 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 MEF2DQ14814 521 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 RTBDNQ9BSG5 229 aaPredicted RBP12.71□□□□□ -0.37
SGMS1-204ENST00000492601 TMEM222Q9H0R3 208 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 FNDC4Q9H6D8 234 aaPredicted RBP12.71□□□□□ -0.37
SGMS1-204ENST00000492601 VSIRQ9H7M9 311 aa12.71□□□□□ -0.37
SGMS1-204ENST00000492601 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-204ENST00000492601 DISC1C4P0D8 188 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 DNASE2O00115 360 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-204ENST00000492601 CORTO00230 105 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 SSBP1Q04837 148 aaKnown RBP12.7□□□□□ -0.38
SGMS1-204ENST00000492601 CLVS1Q8IUQ0 354 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-204ENST00000492601 LHFPL5Q8TAF8 219 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 GLYATL2Q8WU03 294 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 SMIM4Q8WVI0 70 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 CSTL1Q9H114 145 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 MS4A6AQ9H2W1 248 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
SGMS1-204ENST00000492601 NUPR2A6NF83 97 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 MPTX1A8MV57 137 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 CLN5O75503 358 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 B3GALNT1O75752 331 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 CDS2O95674 445 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 SPCS3P61009 180 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 MRPS10P82664 201 aaKnown RBP12.69□□□□□ -0.38
SGMS1-204ENST00000492601 IL18Q14116 193 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 LEMD1Q68G75 181 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 SELENOHQ8IZQ5 122 aaKnown RBP12.69□□□□□ -0.38
SGMS1-204ENST00000492601 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 LINC00476Q8WZB0 136 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 DIRAS2Q96HU8 199 aa12.69□□□□□ -0.38
SGMS1-204ENST00000492601 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.69□□□□□ -0.38
SGMS1-204ENST00000492601 CD5P06127 495 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 BSXQ3C1V8 233 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 TIGITQ495A1 244 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 TMEM268Q5VZI3 342 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 FAM219AQ8IW50 185 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 FAM24BQ8N5W8 94 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 OR4X1Q8NH49 305 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 RBPMSQ93062 196 aaKnown RBP12.68□□□□□ -0.38
SGMS1-204ENST00000492601 HEYLQ9NQ87 328 aaPredicted RBP12.68□□□□□ -0.38
SGMS1-204ENST00000492601 CACNG5Q9UF02 275 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 RABAC1Q9UI14 185 aa12.68□□□□□ -0.38
SGMS1-204ENST00000492601 LY6G6CO95867 125 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 AKAIN1P0CW23 69 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 NPPCP23582 126 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 RPL5P46777 297 aaKnown RBP12.67□□□□□ -0.38
SGMS1-204ENST00000492601 DEFB131AP59861 70 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 SURF2Q15527 256 aaPredicted RBP12.67□□□□□ -0.38
SGMS1-204ENST00000492601 CEMP1Q6PRD7 247 aaPredicted RBP12.67□□□□□ -0.38
SGMS1-204ENST00000492601 TMEM217Q8N7C4 229 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 OR51S1Q8NGJ8 323 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 TMEM230Q96A57 120 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 GPR146Q96CH1 333 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 METTL26Q96S19 204 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 TMEM231Q9H6L2 316 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 KMT2AQ03164 3969 aa12.67□□□□□ -0.38
SGMS1-204ENST00000492601 CRYM-AS1A6NIL9 109 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 CEBPZOSA8MTT3 80 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 NXPH3O95157 252 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 CA1P00915 261 aaPredicted RBP12.66□□□□□ -0.38
SGMS1-204ENST00000492601 IGKV1-17P01599 117 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 HTR2BP41595 481 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 DHODHQ02127 395 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 AARDQ4LEZ3 155 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 STXBP6Q8NFX7 210 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 OR52E5Q8NH55 327 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 DYNC2LI1Q8TCX1 351 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 GATAD1Q8WUU5 269 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 RARRES2Q99969 163 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 PRR13Q9NZ81 148 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 GPR132Q9UNW8 380 aa12.66□□□□□ -0.38
SGMS1-204ENST00000492601 A0A1W2PS18 150 aa12.65□□□□□ -0.38
SGMS1-204ENST00000492601 CTDSPLO15194 276 aa12.65□□□□□ -0.38
SGMS1-204ENST00000492601 SCGB2A1O75556 95 aa12.65□□□□□ -0.38
SGMS1-204ENST00000492601 ATF4P18848 351 aaPredicted RBP12.65□□□□□ -0.38
SGMS1-204ENST00000492601 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
SGMS1-204ENST00000492601 RAB2BQ8WUD1 216 aa12.65□□□□□ -0.38
SGMS1-204ENST00000492601 PRRT1Q99946 306 aa12.65□□□□□ -0.38
SGMS1-204ENST00000492601 CCDC59Q9P031 241 aaKnown RBP12.65□□□□□ -0.38
SGMS1-204ENST00000492601 FRAS1Q86XX4 4008 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 RPS10-NUDT3A0A1W2PQS6 291 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 CRYBB3P26998 211 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 P2RY1P47900 373 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 RND2P52198 227 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 PRSS54Q6PEW0 395 aa12.64□□□□□ -0.39
SGMS1-204ENST00000492601 KLK5Q9Y337 293 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-204ENST00000492601 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
SGMS1-204ENST00000492601 ANKRD20A5PA0PJZ0 165 aa12.63□□□□□ -0.39
SGMS1-204ENST00000492601 RBMS2Q15434 407 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 336.2 ms