RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ST6GALNAC6Q969X2 333 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 MISP3Q96FF7 219 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 NUPR1O60356 82 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 TNXAQ16473 311 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 TMEM177Q53S58 311 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 FAM209BQ5JX69 171 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 TMEM256Q8N2U0 113 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 MUC15Q8N387 334 aa10.03□□□□□ -0.8
HMGN1-220ENST00000492280 CCL21O00585 134 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 MFAP2P55001 183 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 UBE2L3P68036 154 aaKnown RBP10.02□□□□□ -0.81
HMGN1-220ENST00000492280 CTAG1AP78358 180 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 MRGPRG-AS1Q2M3A8 158 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 LEMD1Q68G75 181 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 KCNIP4Q6PIL6 250 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 OR5AU1Q8NGC0 362 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 SLC35E1Q96K37 410 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 PITPNC1Q9UKF7 332 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 WASHC3Q9Y3C0 194 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 CENPEQ02224 2701 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 TRAV34A0A0B4J273 112 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 ERHP84090 104 aaKnown RBP10.02□□□□□ -0.81
HMGN1-220ENST00000492280 RBPJQ06330 500 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 OR10G8Q8NGN5 311 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 RPH3ALQ9UNE2 315 aa10.02□□□□□ -0.81
HMGN1-220ENST00000492280 ELOA3CA0A087WX78 387 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-220ENST00000492280 OR5G3P0C626 314 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 MGST1P10620 155 aaKnown RBP10.01□□□□□ -0.81
HMGN1-220ENST00000492280 APOBEC3AP31941 199 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-220ENST00000492280 ADMP35318 185 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 ERVFC1-1P60608 527 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 S100A12P80511 92 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 FBLN7Q53RD9 439 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 EAF1Q96JC9 268 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM133Q9H2Q1 129 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 IGKV1D-37A0A075B6S9 117 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 F2Z2F3 143 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 ORM2P19652 201 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 USF1P22415 310 aaPredicted RBP10.01□□□□□ -0.81
HMGN1-220ENST00000492280 LDLRAD2Q5SZI1 272 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 PATE2Q6UY27 113 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM167AQ8TBQ9 72 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 PFDN5Q99471 154 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 SLC25A2Q9BXI2 301 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 ZNF355PQ9NSJ1 428 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 ZFYVE26Q68DK2 2539 aa10.01□□□□□ -0.81
HMGN1-220ENST00000492280 C22orf46C9J442 243 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 SRP14P37108 136 aaKnown RBP10□□□□□ -0.81
HMGN1-220ENST00000492280 PPOXP50336 477 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 RPL15P61313 204 aaKnown RBP10□□□□□ -0.81
HMGN1-220ENST00000492280 GNG5P63218 68 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 SLC25A33Q9BSK2 321 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 FBXL15Q9H469 300 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 ONECUT1Q9UBC0 465 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 MSRB2Q9Y3D2 182 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 S4R3C0 116 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 VSTM5A8MXK1 200 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 TOX4O94842 621 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 GNG4P50150 75 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 KLRD1Q13241 179 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM249Q2WGJ8 235 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 PDPNQ86YL7 162 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 OR8I2Q8N0Y5 310 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 PNKDQ8N490 385 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 KIR3DL3Q8N743 410 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 BLNKQ8WV28 456 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 TMEM186Q96B77 213 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 SSBP3Q9BWW4 388 aaPredicted RBP10□□□□□ -0.81
HMGN1-220ENST00000492280 NGBQ9NPG2 151 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 TECRQ9NZ01 308 aaKnown RBP10□□□□□ -0.81
HMGN1-220ENST00000492280 PIEZO1Q92508 2521 aa10□□□□□ -0.81
HMGN1-220ENST00000492280 HELTA6NFD8 242 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 ZNF705GA8MUZ8 300 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-220ENST00000492280 FCN1O00602 326 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 COX7A2P2O60397 106 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 MT-CO2P00403 227 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 FAM167A-AS1Q96KT0 104 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 FAM103A1Q9BTL3 118 aaKnown RBP9.99□□□□□ -0.81
HMGN1-220ENST00000492280 IER3P46695 156 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 CNN1P51911 297 aaKnown RBP9.99□□□□□ -0.81
HMGN1-220ENST00000492280 NHLH1Q02575 133 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 KIAA1644Q3SXP7 199 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 OR1B1Q8NGR6 318 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 HILPDAQ9Y5L2 63 aa9.99□□□□□ -0.81
HMGN1-220ENST00000492280 IGLC7A0M8Q6 106 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 PSMB11A5LHX3 300 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 C8orf88P0DMB2 117 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 ZNF672Q499Z4 452 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-220ENST00000492280 SERTAD4Q9NUC0 356 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 PPIAL4CA0A0B4J2A2 164 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 B9A039 149 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 PPIAL4GP0DN37 164 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 ARF6P62330 175 aa9.98□□□□□ -0.81
HMGN1-220ENST00000492280 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms