RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 A0A1W2PS18 150 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 DBX1A6NMT0 343 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 I3L2K1 104 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 ZNF79Q15937 498 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 SP6Q3SY56 376 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 LINC00299Q6ZSB3 139 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 WFDC10AQ9H1F0 79 aa12.4□□□□□ -0.42
PDLIM2-217ENST00000491330 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 A0A0B4J293 547 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 DNASE2O00115 360 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 ST8SIA3O43173 380 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 ZNF207O43670 478 aaKnown RBP12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 ADMP35318 185 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 OPRK1P41145 380 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 HTR2BP41595 481 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 SPCS3P61009 180 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 TMEM128Q5BJH2 165 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 TMEM217Q8N7C4 229 aa12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 HEYLQ9NQ87 328 aaPredicted RBP12.39□□□□□ -0.43
PDLIM2-217ENST00000491330 IGHV3OR16-8A0A075B7F1 116 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 A0A0B4J2A0 478 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 KIR2DL5BA0A0G2JN68 375 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 KIR2DL5BA0A0G2JPC4 375 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 INPP1P49441 399 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 EIF2B2P49770 351 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 RPL11P62913 178 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 SPINK9Q5DT21 86 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 PVRIGQ6DKI7 326 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 ETFRF1Q6IPR1 90 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 Q6ZWC4 215 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 KIR2DL5AQ8N109 375 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 KIR2DL5BQ8NHK3 375 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 TMEM230Q96A57 120 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 OR10C1Q96KK4 312 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 C7orf50Q9BRJ6 194 aaKnown RBP12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 RETNQ9HD89 108 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 SHPKQ9UHJ6 478 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 TP53TG1Q9Y2A0 90 aa12.38□□□□□ -0.43
PDLIM2-217ENST00000491330 STAB2Q8WWQ8 2551 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 CEBPZOSA8MTT3 80 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 NPPCP23582 126 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 ATP5IP56385 69 aaPredicted RBP12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 TMEM268Q5VZI3 342 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 SELENOHQ8IZQ5 122 aaKnown RBP12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 LGI3Q8N145 548 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 UBQLN2Q9UHD9 624 aa12.37□□□□□ -0.43
PDLIM2-217ENST00000491330 CENPXA8MT69 81 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 CHEK1O14757 476 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 SPRY2O43597 315 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 SULT1A3P0DMM9 295 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 SULT1A4P0DMN0 295 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 CCR6P51684 374 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 TMEM187Q14656 261 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 IZUMO4Q1ZYL8 232 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 METTL26Q96S19 204 aa12.36□□□□□ -0.43
PDLIM2-217ENST00000491330 IGKV3-7A0A075B6H7 116 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 F8W735 103 aaPredicted RBP12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 TMEM50AO95807 157 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 IGHV3-48P01763 117 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 SLC25A4P12235 298 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 TFPI2P48307 235 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 BSXQ3C1V8 233 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 LRTM2Q8N967 370 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 RNF2Q99496 336 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 PFDN2Q9UHV9 154 aa12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 PUS1Q9Y606 427 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDLIM2-217ENST00000491330 LCE6AA0A183 80 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 CLN5O75503 358 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 SLC25A6P12236 298 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 AKR1C4P17516 323 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 TOMM20LQ6UXN7 152 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 TCF24Q7RTU0 167 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 OR4X1Q8NH49 305 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 LHFPL5Q8TAF8 219 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 RNASEH2CQ8TDP1 164 aaKnown RBP12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 Q8WTZ3 238 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
PDLIM2-217ENST00000491330 IGHV3-49A0A0A0MS15 119 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 A0A1B0GU03 582 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 DFFBO76075 338 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 RNASE2P10153 161 aaKnown RBP12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 SUPT4H1P63272 117 aaKnown RBP12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 SMCO1Q147U7 214 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 NMSQ5H8A3 153 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 CENPSQ8N2Z9 138 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 GPR146Q96CH1 333 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 OVOL2Q9BRP0 275 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 DNAH9Q9NYC9 4486 aa12.33□□□□□ -0.44
PDLIM2-217ENST00000491330 A0A0G2JRQ6 117 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 MPTX1A8MV57 137 aa12.32□□□□□ -0.44
PDLIM2-217ENST00000491330 FAM90A26D6RGX4 464 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms