RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 GATAD1Q8WUU5 269 aa10.02□□□□□ -0.81
COL6A3-211ENST00000491233 RRNAD1Q96FB5 475 aaKnown RBP10.02□□□□□ -0.81
COL6A3-211ENST00000491233 MS4A6AQ9H2W1 248 aa10.02□□□□□ -0.81
COL6A3-211ENST00000491233 FNDC4Q9H6D8 234 aaPredicted RBP10.02□□□□□ -0.81
COL6A3-211ENST00000491233 ENY2Q9NPA8 101 aa10.02□□□□□ -0.81
COL6A3-211ENST00000491233 KLK5Q9Y337 293 aaPredicted RBP10.02□□□□□ -0.81
COL6A3-211ENST00000491233 OPRK1P41145 380 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 DEFB131AP59861 70 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 RPL11P62913 178 aaKnown RBP10.01□□□□□ -0.81
COL6A3-211ENST00000491233 LEMD1Q68G75 181 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 FAAP20Q6NZ36 180 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 STEAP1BQ6NZ63 245 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 FAM24BQ8N5W8 94 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 C15orf40Q8WUR7 153 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 PHLDA1Q8WV24 401 aaPredicted RBP10.01□□□□□ -0.81
COL6A3-211ENST00000491233 RARRES2Q99969 163 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 MIXL1Q9H2W2 232 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 TMEM231Q9H6L2 316 aa10.01□□□□□ -0.81
COL6A3-211ENST00000491233 TRAV2A0A0B4J234 112 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 GABARAPH6UMI1 98 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 DNASE2O00115 360 aaPredicted RBP10□□□□□ -0.81
COL6A3-211ENST00000491233 CLN5O75503 358 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 CA1P00915 261 aaPredicted RBP10□□□□□ -0.81
COL6A3-211ENST00000491233 OR5AC1P0C628 307 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 Q6ZRM9 215 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 OR11H2Q8NH07 326 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 RABAC1Q9UI14 185 aa10□□□□□ -0.81
COL6A3-211ENST00000491233 RGS5O15539 181 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 B3GALNT1O75752 331 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 MLANAQ16655 118 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 BSXQ3C1V8 233 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 OR4X1Q8NH49 305 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 LHFPL5Q8TAF8 219 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 METTL26Q96S19 204 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 TMEM222Q9H0R3 208 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
COL6A3-211ENST00000491233 NAA60Q9H7X0 242 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 C14orf166Q9Y224 244 aaKnown RBP9.99□□□□□ -0.81
COL6A3-211ENST00000491233 BOLA1Q9Y3E2 137 aa9.99□□□□□ -0.81
COL6A3-211ENST00000491233 A0A1W2PS18 150 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 SCGB2A1O75556 95 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 NPPCP23582 126 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 RPL5P46777 297 aaKnown RBP9.98□□□□□ -0.81
COL6A3-211ENST00000491233 P2RY1P47900 373 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 NANOS2P60321 138 aaKnown RBP9.98□□□□□ -0.81
COL6A3-211ENST00000491233 SPCS3P61009 180 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 MRPS10P82664 201 aaKnown RBP9.98□□□□□ -0.81
COL6A3-211ENST00000491233 SSBP1Q04837 148 aaKnown RBP9.98□□□□□ -0.81
COL6A3-211ENST00000491233 TMEM187Q14656 261 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 MEF2DQ14814 521 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 TIGITQ495A1 244 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 AARDQ4LEZ3 155 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 FAM219AQ8IW50 185 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 STXBP6Q8NFX7 210 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 C11orf45Q8TAV5 145 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 SMIM4Q8WVI0 70 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 TMEM230Q96A57 120 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 RTBDNQ9BSG5 229 aaPredicted RBP9.98□□□□□ -0.81
COL6A3-211ENST00000491233 CACNG5Q9UF02 275 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 FBXL17Q9UF56 701 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 AGRNO00468 2067 aa9.98□□□□□ -0.81
COL6A3-211ENST00000491233 TEX13DA0A0J9YY54 714 aaPredicted RBP9.97□□□□□ -0.81
COL6A3-211ENST00000491233 RPS10-NUDT3A0A1W2PQS6 291 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 DISC1C4P0D8 188 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 K7EQG2 157 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 CTDSP2O14595 271 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 DEFB4AO15263 64 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 CDS2O95674 445 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 IGKV1-17P01599 117 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 CRYBB3P26998 211 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 HTR2BP41595 481 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 SPCS2Q15005 226 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 TMEM268Q5VZI3 342 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 GPR141Q7Z602 305 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 STHQ8IWL8 128 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 OR4C16Q8NGL9 310 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 OR52E5Q8NH55 327 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 GLYATL2Q8WU03 294 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 RBPMSQ93062 196 aaKnown RBP9.97□□□□□ -0.81
COL6A3-211ENST00000491233 MRPS26Q9BYN8 205 aaKnown RBP9.97□□□□□ -0.81
COL6A3-211ENST00000491233 MFFQ9GZY8 342 aa9.97□□□□□ -0.81
COL6A3-211ENST00000491233 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.97□□□□□ -0.81
COL6A3-211ENST00000491233 NXPH3O95157 252 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 ZNF688P0C7X2 276 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 ALDH3B2P48448 385 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 RND2P52198 227 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 DHODHQ02127 395 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 RBMS2Q15434 407 aaKnown RBP9.96□□□□□ -0.82
COL6A3-211ENST00000491233 SURF2Q15527 256 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-211ENST00000491233 SELENOHQ8IZQ5 122 aaKnown RBP9.96□□□□□ -0.82
COL6A3-211ENST00000491233 SLC24A4Q8NFF2 622 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 GPR146Q96CH1 333 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 GRAMD2BQ96HH9 432 aa9.96□□□□□ -0.82
COL6A3-211ENST00000491233 NARS2Q96I59 477 aaKnown RBP9.96□□□□□ -0.82
COL6A3-211ENST00000491233 HEYLQ9NQ87 328 aaPredicted RBP9.96□□□□□ -0.82
COL6A3-211ENST00000491233 TRAV30A0A087WSZ9 112 aa9.95□□□□□ -0.82
COL6A3-211ENST00000491233 CRYM-AS1A6NIL9 109 aa9.95□□□□□ -0.82
COL6A3-211ENST00000491233 CEBPZOSA8MTT3 80 aa9.95□□□□□ -0.82
COL6A3-211ENST00000491233 DEDDO75618 318 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms