RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 C6orf62Q9GZU0 229 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 RABL2AQ9UBK7 228 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 RABL2BQ9UNT1 228 aa13.32□□□□□ -0.28
HMGN1-219ENST00000491183 PUS1Q9Y606 427 aaKnown RBP eCLIP13.32□□□□□ -0.28
HMGN1-219ENST00000491183 IGKV3-7A0A075B6H7 116 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 H3BMQ9 156 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 CORTO00230 105 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 TNFSF8P32971 234 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 TFPI2P48307 235 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 APOC4P55056 127 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 SPCS3P61009 180 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 DHODHQ02127 395 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 ZNF124Q15973 351 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 ZNF600Q6ZNG1 722 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 Q6ZWC4 215 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 WFDC3Q8IUB2 231 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 PRRT1Q99946 306 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 VSIRQ9H7M9 311 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 ENY2Q9NPA8 101 aa13.31□□□□□ -0.28
HMGN1-219ENST00000491183 KIR2DL5BA0A0G2JN68 375 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 KIR2DL5BA0A0G2JPC4 375 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 SPRY2O43597 315 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 RPL35AP18077 110 aaKnown RBP13.3□□□□□ -0.28
HMGN1-219ENST00000491183 TMEM268Q5VZI3 342 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 TCF24Q7RTU0 167 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 KIR2DL5AQ8N109 375 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 GBGT1Q8N5D6 347 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 KIR2DL5BQ8NHK3 375 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 TMEM230Q96A57 120 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 LYSTQ99698 3801 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 CACNG5Q9UF02 275 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 RSL24D1Q9UHA3 163 aaKnown RBP13.3□□□□□ -0.28
HMGN1-219ENST00000491183 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 TMEM56-RWDD3S4R434 201 aa13.3□□□□□ -0.28
HMGN1-219ENST00000491183 IGHV3-66A0A0C4DH42 116 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 UBE2CO00762 179 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 CLN5O75503 358 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 OPRK1P41145 380 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 DEFB135Q30KP9 77 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 OR4X1Q8NH49 305 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 GALNT14Q96FL9 552 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 MAP6D1Q9H9H5 199 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 PRR13Q9NZ81 148 aa13.29□□□□□ -0.28
HMGN1-219ENST00000491183 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
HMGN1-219ENST00000491183 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.28
HMGN1-219ENST00000491183 TMEM187Q14656 261 aa13.28□□□□□ -0.28
HMGN1-219ENST00000491183 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
HMGN1-219ENST00000491183 RNF183Q96D59 192 aa13.28□□□□□ -0.28
HMGN1-219ENST00000491183 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 DFFBO76075 338 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 BMI1P35226 326 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 HTR2BP41595 481 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 CMC4P56277 68 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-219ENST00000491183 MCFD2Q8NI22 146 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 TMEM170AQ8WVE7 144 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 HEYLQ9NQ87 328 aaPredicted RBP13.27□□□□□ -0.29
HMGN1-219ENST00000491183 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.29
HMGN1-219ENST00000491183 NOL3O60936 208 aaKnown RBP13.26□□□□□ -0.29
HMGN1-219ENST00000491183 IGKV1-17P01599 117 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 SUPT4H1P63272 117 aaKnown RBP13.26□□□□□ -0.29
HMGN1-219ENST00000491183 TIGITQ495A1 244 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 C2orf83Q53S99 150 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 LYG2Q86SG7 212 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 IL22RA2Q969J5 263 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 MS4A6AQ9H2W1 248 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 MCUBQ9NWR8 336 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 KCNIP3Q9Y2W7 256 aa13.26□□□□□ -0.29
HMGN1-219ENST00000491183 CEBPZOSA8MTT3 80 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 NXPH3O95157 252 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 CD5P06127 495 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 NPPCP23582 126 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 TNFRSF9Q07011 255 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 FAM24BQ8N5W8 94 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 SCGB3A2Q96PL1 93 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 DNAH1Q9P2D7 4330 aa13.25□□□□□ -0.29
HMGN1-219ENST00000491183 SULT1A3P0DMM9 295 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 SULT1A4P0DMN0 295 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 AKR1C4P17516 323 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 CRYBB3P26998 211 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 PRSS54Q6PEW0 395 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 LYZL2Q7Z4W2 148 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 SLC24A4Q8NFF2 622 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
HMGN1-219ENST00000491183 CSTL1Q9H114 145 aa13.24□□□□□ -0.29
HMGN1-219ENST00000491183 TRAV30A0A087WSZ9 112 aa13.23□□□□□ -0.29
HMGN1-219ENST00000491183 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
HMGN1-219ENST00000491183 RPS10-NUDT3A0A1W2PQS6 291 aa13.23□□□□□ -0.29
HMGN1-219ENST00000491183 DNASE2O00115 360 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-219ENST00000491183 IGLC1P0CG04 106 aa13.23□□□□□ -0.29
HMGN1-219ENST00000491183 RND2P52198 227 aa13.23□□□□□ -0.29
HMGN1-219ENST00000491183 RPL11P62913 178 aaKnown RBP13.23□□□□□ -0.29
HMGN1-219ENST00000491183 KLF9Q13886 244 aaPredicted RBP13.23□□□□□ -0.29
HMGN1-219ENST00000491183 RBMS2Q15434 407 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms