RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 GINS3Q9BRX5 216 aa14.24□□□□□ -0.13
TNFRSF1B-202ENST00000489921 MS4A6AQ9H2W1 248 aa14.24□□□□□ -0.13
TNFRSF1B-202ENST00000489921 COPZ2Q9P299 210 aa14.24□□□□□ -0.13
TNFRSF1B-202ENST00000489921 IGHV3-66A0A0C4DH42 116 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 NUPR2A6NF83 97 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 SPCS2Q15005 226 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 TRIM16LQ309B1 348 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 SCGB2B2Q4G0G5 96 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 C15orf40Q8WUR7 153 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 TMEM222Q9H0R3 208 aa14.23□□□□□ -0.13
TNFRSF1B-202ENST00000489921 VPS13DQ5THJ4 4388 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 CLN5O75503 358 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 ATG12O94817 140 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 OR5AC1P0C628 307 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 RPL5P46777 297 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 CCDC71LQ8N9Z2 235 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 OR4X1Q8NH49 305 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 AGRNO00468 2067 aa14.22□□□□□ -0.13
TNFRSF1B-202ENST00000489921 DNAH10Q8IVF4 4471 aa14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 CORTO00230 105 aa14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 B3GALNT1O75752 331 aa14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 IGKV1-17P01599 117 aa14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 CD5P06127 495 aa14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 HOXA1P49639 335 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 SUB1P53999 127 aaKnown RBP eCLIP14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 SSBP1Q04837 148 aaKnown RBP14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 GATAD1Q8WUU5 269 aa14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 C6orf62Q9GZU0 229 aaPredicted RBP14.21□□□□□ -0.13
TNFRSF1B-202ENST00000489921 TRAV2A0A0B4J234 112 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TEX13DA0A0J9YY54 714 aaPredicted RBP14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 LY6G6CO95867 125 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 CRYBB3P26998 211 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 SPCS3P61009 180 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 PAFAH1B2P68402 229 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 SELENOHQ8IZQ5 122 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 OR52E5Q8NH55 327 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 SMIM4Q8WVI0 70 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RRNAD1Q96FB5 475 aaKnown RBP14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RARRES2Q99969 163 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 PDCD10Q9BUL8 212 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 GPR132Q9UNW8 380 aa14.2□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RGS5O15539 181 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 OPRK1P41145 380 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 DEFB131AP59861 70 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 LEMD1Q68G75 181 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 FAM219AQ8IW50 185 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 OR4C16Q8NGL9 310 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TMEM170AQ8WVE7 144 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 GPR146Q96CH1 333 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 MRPS26Q9BYN8 205 aaKnown RBP14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 NAA60Q9H7X0 242 aa14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.19□□□□□ -0.14
TNFRSF1B-202ENST00000489921 CTDSPLO15194 276 aa14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 GIG44P09565 113 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 NPPCP23582 126 aa14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 MRPS10P82664 201 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 MEF2DQ14814 521 aa14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 SURF2Q15527 256 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TIGITQ495A1 244 aa14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 OR11H2Q8NH07 326 aa14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 PHLDA1Q8WV24 401 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RBPMSQ93062 196 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 U3KQE9 123 aa14.18□□□□□ -0.14
TNFRSF1B-202ENST00000489921 CRYM-AS1A6NIL9 109 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 K7EQG2 157 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 DNASE2O00115 360 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 GPR141Q7Z602 305 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TMEM217Q8N7C4 229 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 DYNC2LI1Q8TCX1 351 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 ENY2Q9NPA8 101 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TMEM56-RWDD3S4R434 201 aa14.17□□□□□ -0.14
TNFRSF1B-202ENST00000489921 HTR2BP41595 481 aa14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RPL11P62913 178 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RBMS2Q15434 407 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 C2orf83Q53S99 150 aa14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 PRSS54Q6PEW0 395 aa14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RNASE11Q8TAA1 199 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 DCANP1Q8TF63 244 aa14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TMEM230Q96A57 120 aa14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 C11orf68Q9H3H3 251 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 CACNG5Q9UF02 275 aa14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 C14orf166Q9Y224 244 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 KLK5Q9Y337 293 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1B-202ENST00000489921 DISC1C4P0D8 188 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 NXPH3O95157 252 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 CA1P00915 261 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 IGLC1P0CG04 106 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 AKAIN1P0CW23 69 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 P2RY1P47900 373 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 NANOS2P60321 138 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 DHODHQ02127 395 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TMEM268Q5VZI3 342 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 OR51S1Q8NGJ8 323 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 METTL26Q96S19 204 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 TMEM231Q9H6L2 316 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 RABAC1Q9UI14 185 aa14.15□□□□□ -0.14
TNFRSF1B-202ENST00000489921 A0A1W2PS18 150 aa14.14□□□□□ -0.15
TNFRSF1B-202ENST00000489921 ANKRD20A5PA0PJZ0 165 aa14.14□□□□□ -0.15
TNFRSF1B-202ENST00000489921 TRPT1Q86TN4 253 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms