RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 KLF9Q13886 244 aaPredicted RBP13.34□□□□□ -0.27
ABCF3-217ENST00000489719 AARDQ4LEZ3 155 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 LGI3Q8N145 548 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 TMEM230Q96A57 120 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 OR10C1Q96KK4 312 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 GINS3Q9BRX5 216 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
ABCF3-217ENST00000489719 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
ABCF3-217ENST00000489719 PIGBOS1A0A0B4J2F0 54 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 RPS10-NUDT3A0A1W2PQS6 291 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 OR4C46A6NHA9 309 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 CHEK1O14757 476 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 BMI1P35226 326 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 MLANAQ16655 118 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 SPANXN2Q5MJ10 180 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 TOMM20LQ6UXN7 152 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 ZNF600Q6ZNG1 722 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 RBM38Q9H0Z9 239 aaKnown RBP13.33□□□□□ -0.28
ABCF3-217ENST00000489719 PRR13Q9NZ81 148 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 V9GYH0 126 aa13.33□□□□□ -0.28
ABCF3-217ENST00000489719 IGHV3-49A0A0A0MS15 119 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 A0A0B4J2A0 478 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 CCR6P51684 374 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 SRPXP78539 464 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 CCDC190Q86UF4 302 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 NOXA1Q86UR1 476 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 DEDD2Q8WXF8 326 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 TRIM63Q969Q1 353 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 RNF2Q99496 336 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 GGTLC1Q9BX51 225 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 SHPKQ9UHJ6 478 aa13.32□□□□□ -0.28
ABCF3-217ENST00000489719 TRAV30A0A087WSZ9 112 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 CLN5O75503 358 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 INPP1P49441 399 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 CMC4P56277 68 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-217ENST00000489719 SUPT4H1P63272 117 aaKnown RBP13.31□□□□□ -0.28
ABCF3-217ENST00000489719 PAFAH1B2P68402 229 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 ZNF79Q15937 498 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 BSXQ3C1V8 233 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 C2orf83Q53S99 150 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 LYZL2Q7Z4W2 148 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 SLC25A21Q9BQT8 299 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-217ENST00000489719 FNDC4Q9H6D8 234 aaPredicted RBP13.31□□□□□ -0.28
ABCF3-217ENST00000489719 UBQLN2Q9UHD9 624 aa13.31□□□□□ -0.28
ABCF3-217ENST00000489719 PUS1Q9Y606 427 aaKnown RBP eCLIP13.31□□□□□ -0.28
ABCF3-217ENST00000489719 STAB2Q8WWQ8 2551 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 IGHV3OR16-13A0A075B7E8 117 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 IGHV3-74A0A0B4J1X5 117 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 NXPH3O95157 252 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 CD5P06127 495 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 SMCO1Q147U7 214 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 TMEM128Q5BJH2 165 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 CASC10Q5T4H9 136 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 RNASEH2CQ8TDP1 164 aaKnown RBP13.3□□□□□ -0.28
ABCF3-217ENST00000489719 ZNF414Q96IQ9 312 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 RETNQ9HD89 108 aa13.3□□□□□ -0.28
ABCF3-217ENST00000489719 IGKV3-7A0A075B6H7 116 aa13.29□□□□□ -0.28
ABCF3-217ENST00000489719 NPPCP23582 126 aa13.29□□□□□ -0.28
ABCF3-217ENST00000489719 NMSQ5H8A3 153 aa13.29□□□□□ -0.28
ABCF3-217ENST00000489719 ETFRF1Q6IPR1 90 aa13.29□□□□□ -0.28
ABCF3-217ENST00000489719 SLC24A4Q8NFF2 622 aa13.29□□□□□ -0.28
ABCF3-217ENST00000489719 A0A1B0GU03 582 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 IFNA10P01566 189 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 SLC25A4P12235 298 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 VAMP1P23763 118 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 TFPI2P48307 235 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 RPL11P62913 178 aaKnown RBP13.28□□□□□ -0.28
ABCF3-217ENST00000489719 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 OR1S1Q8NH92 325 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 FAM110AQ9BQ89 295 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 TMEM231Q9H6L2 316 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 MRPL36Q9P0J6 103 aaKnown RBP13.28□□□□□ -0.28
ABCF3-217ENST00000489719 U3KQ87 197 aa13.28□□□□□ -0.28
ABCF3-217ENST00000489719 A0A1W2PS18 150 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 NPY1RP25929 384 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 APOC4P55056 127 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 DTD1Q8TEA8 209 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 Q8WTZ3 238 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 NARS2Q96I59 477 aaKnown RBP13.27□□□□□ -0.29
ABCF3-217ENST00000489719 METTL26Q96S19 204 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 HSPB7Q9UBY9 170 aa13.27□□□□□ -0.29
ABCF3-217ENST00000489719 NBEAL2Q6ZNJ1 2754 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 IGHV3-66A0A0C4DH42 116 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 DUXBA0A1W2PPF3 345 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 DNASE2O00115 360 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-217ENST00000489719 APOHP02749 345 aaPredicted RBP13.26□□□□□ -0.29
ABCF3-217ENST00000489719 TIGITQ495A1 244 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 TRIQKQ629K1 86 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 FAM90A2PQ658T7 463 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 ZFAND6Q6FIF0 208 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 PRSS54Q6PEW0 395 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 OR1S2Q8NGQ3 325 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 ST8SIA2Q92186 375 aa13.26□□□□□ -0.29
ABCF3-217ENST00000489719 SRRQ9GZT4 340 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms