RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PAFAH1B2P68402 229 aa18.06■□□□□ 0.48
LIME1-206ENST00000487026 SPCS2Q15005 226 aa18.06■□□□□ 0.48
LIME1-206ENST00000487026 LINC00476Q8WZB0 136 aa18.06■□□□□ 0.48
LIME1-206ENST00000487026 MS4A6AQ9H2W1 248 aa18.06■□□□□ 0.48
LIME1-206ENST00000487026 FNDC4Q9H6D8 234 aaPredicted RBP18.06■□□□□ 0.48
LIME1-206ENST00000487026 ENY2Q9NPA8 101 aa18.06■□□□□ 0.48
LIME1-206ENST00000487026 RPL11P62913 178 aaKnown RBP18.05■□□□□ 0.48
LIME1-206ENST00000487026 CEMP1Q6PRD7 247 aaPredicted RBP18.05■□□□□ 0.48
LIME1-206ENST00000487026 RTBDNQ9BSG5 229 aaPredicted RBP18.05■□□□□ 0.48
LIME1-206ENST00000487026 NUPR2A6NF83 97 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 MPTX1A8MV57 137 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 DNASE2O00115 360 aaPredicted RBP18.04■□□□□ 0.48
LIME1-206ENST00000487026 LY6G6CO95867 125 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 OR5AC1P0C628 307 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 GPR141Q7Z602 305 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 LHFPL5Q8TAF8 219 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 TMEM222Q9H0R3 208 aa18.04■□□□□ 0.48
LIME1-206ENST00000487026 OPRK1P41145 380 aa18.03■□□□□ 0.48
LIME1-206ENST00000487026 LEMD1Q68G75 181 aa18.03■□□□□ 0.48
LIME1-206ENST00000487026 FAM24BQ8N5W8 94 aa18.03■□□□□ 0.48
LIME1-206ENST00000487026 GLYATL2Q8WU03 294 aa18.03■□□□□ 0.48
LIME1-206ENST00000487026 C14orf166Q9Y224 244 aaKnown RBP18.03■□□□□ 0.48
LIME1-206ENST00000487026 TEX13DA0A0J9YY54 714 aaPredicted RBP18.02■□□□□ 0.48
LIME1-206ENST00000487026 CORTO00230 105 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 CLN5O75503 358 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 CDS2O95674 445 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 CD5P06127 495 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 ALDH3B2P48448 385 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 DEFB131AP59861 70 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 RARRES2Q99969 163 aa18.02■□□□□ 0.48
LIME1-206ENST00000487026 MRPS26Q9BYN8 205 aaKnown RBP18.02■□□□□ 0.48
LIME1-206ENST00000487026 B3GALNT1O75752 331 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 NPPCP23582 126 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 SPCS3P61009 180 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 SSBP1Q04837 148 aaKnown RBP18.01■□□□□ 0.47
LIME1-206ENST00000487026 MEF2DQ14814 521 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 BSXQ3C1V8 233 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 SELENOHQ8IZQ5 122 aaKnown RBP18.01■□□□□ 0.47
LIME1-206ENST00000487026 OR4X1Q8NH49 305 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 NAA60Q9H7X0 242 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.01■□□□□ 0.47
LIME1-206ENST00000487026 RABAC1Q9UI14 185 aa18.01■□□□□ 0.47
LIME1-206ENST00000487026 DISC1C4P0D8 188 aa18■□□□□ 0.47
LIME1-206ENST00000487026 ATF4P18848 351 aaPredicted RBP18■□□□□ 0.47
LIME1-206ENST00000487026 RPL5P46777 297 aaKnown RBP18■□□□□ 0.47
LIME1-206ENST00000487026 TIGITQ495A1 244 aa18■□□□□ 0.47
LIME1-206ENST00000487026 TMEM217Q8N7C4 229 aa18■□□□□ 0.47
LIME1-206ENST00000487026 SMIM4Q8WVI0 70 aa18■□□□□ 0.47
LIME1-206ENST00000487026 TMEM230Q96A57 120 aa18■□□□□ 0.47
LIME1-206ENST00000487026 GPR146Q96CH1 333 aa18■□□□□ 0.47
LIME1-206ENST00000487026 MRPS10P82664 201 aaKnown RBP17.99■□□□□ 0.47
LIME1-206ENST00000487026 IL18Q14116 193 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 CLVS1Q8IUQ0 354 aaPredicted RBP17.99■□□□□ 0.47
LIME1-206ENST00000487026 FAM219AQ8IW50 185 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 OR4C16Q8NGL9 310 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 OR11H2Q8NH07 326 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 GATAD1Q8WUU5 269 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 DIRAS2Q96HU8 199 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 HEYLQ9NQ87 328 aaPredicted RBP17.99■□□□□ 0.47
LIME1-206ENST00000487026 CACNG5Q9UF02 275 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 GPR132Q9UNW8 380 aa17.99■□□□□ 0.47
LIME1-206ENST00000487026 CA1P00915 261 aaPredicted RBP17.98■□□□□ 0.47
LIME1-206ENST00000487026 IGKV1-17P01599 117 aa17.98■□□□□ 0.47
LIME1-206ENST00000487026 AARDQ4LEZ3 155 aa17.98■□□□□ 0.47
LIME1-206ENST00000487026 TMEM268Q5VZI3 342 aa17.98■□□□□ 0.47
LIME1-206ENST00000487026 OR52E5Q8NH55 327 aa17.98■□□□□ 0.47
LIME1-206ENST00000487026 PHLDA1Q8WV24 401 aaPredicted RBP17.98■□□□□ 0.47
LIME1-206ENST00000487026 RBPMSQ93062 196 aaKnown RBP17.98■□□□□ 0.47
LIME1-206ENST00000487026 METTL26Q96S19 204 aa17.98■□□□□ 0.47
LIME1-206ENST00000487026 TMEM231Q9H6L2 316 aa17.98■□□□□ 0.47
LIME1-206ENST00000487026 KLK5Q9Y337 293 aaPredicted RBP17.98■□□□□ 0.47
LIME1-206ENST00000487026 NXPH3O95157 252 aa17.97■□□□□ 0.47
LIME1-206ENST00000487026 AKAIN1P0CW23 69 aa17.97■□□□□ 0.47
LIME1-206ENST00000487026 CRYBB3P26998 211 aa17.97■□□□□ 0.47
LIME1-206ENST00000487026 HTR2BP41595 481 aa17.97■□□□□ 0.47
LIME1-206ENST00000487026 DHODHQ02127 395 aa17.97■□□□□ 0.47
LIME1-206ENST00000487026 STXBP6Q8NFX7 210 aa17.97■□□□□ 0.47
LIME1-206ENST00000487026 A0A1W2PS18 150 aa17.96■□□□□ 0.47
LIME1-206ENST00000487026 CRYM-AS1A6NIL9 109 aa17.96■□□□□ 0.47
LIME1-206ENST00000487026 DEFB4AO15263 64 aa17.96■□□□□ 0.47
LIME1-206ENST00000487026 NANOS2P60321 138 aaKnown RBP17.96■□□□□ 0.47
LIME1-206ENST00000487026 RBMS2Q15434 407 aaKnown RBP17.96■□□□□ 0.47
LIME1-206ENST00000487026 SURF2Q15527 256 aaPredicted RBP17.96■□□□□ 0.47
LIME1-206ENST00000487026 OR51S1Q8NGJ8 323 aa17.96■□□□□ 0.47
LIME1-206ENST00000487026 PRR13Q9NZ81 148 aa17.96■□□□□ 0.47
LIME1-206ENST00000487026 KMT2AQ03164 3969 aa17.96■□□□□ 0.46
LIME1-206ENST00000487026 TRAV2A0A0B4J234 112 aa17.95■□□□□ 0.46
LIME1-206ENST00000487026 CEBPZOSA8MTT3 80 aa17.95■□□□□ 0.46
LIME1-206ENST00000487026 P2RY1P47900 373 aa17.95■□□□□ 0.46
LIME1-206ENST00000487026 PRSS54Q6PEW0 395 aa17.95■□□□□ 0.46
LIME1-206ENST00000487026 K7EQG2 157 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 CTDSPLO15194 276 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 RND2P52198 227 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 C2orf83Q53S99 150 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 DYNC2LI1Q8TCX1 351 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 TMEM170AQ8WVE7 144 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 TMEM56-RWDD3S4R434 201 aa17.94■□□□□ 0.46
LIME1-206ENST00000487026 TRAV30A0A087WSZ9 112 aa17.93■□□□□ 0.46
LIME1-206ENST00000487026 RPS10-NUDT3A0A1W2PQS6 291 aa17.93■□□□□ 0.46
LIME1-206ENST00000487026 SCGB2A1O75556 95 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms