RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 GTF3C1Q12789 2109 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 TANC2Q9HCD6 1990 aa5.69□□□□□ -1.5
SMARCAL1-212ENST00000486983 USF3Q68DE3 2245 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 RAI1Q7Z5J4 1906 aaPredicted RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 NDUFB4O95168 129 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGLV1-47P01700 117 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGLV2-23P01705 113 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGHV2-70P01814 119 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 TRGC1P0CF51 173 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 DEFA4P12838 97 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 SELENOTP62341 195 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 FOXL1Q12952 345 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 GAMTQ14353 236 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZNF672Q499Z4 452 aaPredicted RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 COA6Q5JTJ3 125 aaKnown RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 CST9LP1Q5W188 147 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZCCHC24Q8N2G6 241 aaKnown RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 C11orf42Q8N5U0 333 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 TEX45Q8NA69 505 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 THAP8Q8NA92 274 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR2T10Q8NGZ9 312 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 TMEM190Q8WZ59 177 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 ACY3Q96HD9 319 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 PFDN5Q99471 154 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 RNF5Q99942 180 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 HINT2Q9BX68 163 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 SEPSECSQ9HD40 501 aaKnown RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 GAR1Q9NY12 217 aaKnown RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZNRD1Q9P1U0 126 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 PITPNC1Q9UKF7 332 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 AMMECR1Q9Y4X0 333 aaPredicted RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 YTHDF2Q9Y5A9 579 aaKnown RBP5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZZEF1O43149 2961 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 CEP295Q9C0D2 2601 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 MGAQ8IWI9 3026 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 KIAA2026Q5HYC2 2103 aa5.68□□□□□ -1.5
SMARCAL1-212ENST00000486983 LAMA5O15230 3695 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 URB1O60287 2271 aaKnown RBP5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 DSCAML1Q8TD84 2053 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGKV1OR2-108A0A075B7D4 117 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGHV2-26A0A0B4J1V2 119 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 A0A1W2PRE2 83 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 PSMB11A5LHX3 300 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 CGB1A6NKQ9 187 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 CORTO00230 105 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 MYOD1P15172 320 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 S100A2P29034 98 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 COMPP49747 757 aaPredicted RBP5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 PDLIM4P50479 330 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 PRRX1P54821 245 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 UBE2G2P60604 165 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 ACTL10Q5JWF8 245 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 FAM78BQ5VT40 261 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 ETFRF1Q6IPR1 90 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZNF841Q6ZN19 808 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 MMD2Q8IY49 270 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 HIST3H2BBQ8N257 126 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 MUC15Q8N387 334 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR1L4Q8NGR5 311 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 FRZBQ92765 325 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 SFRP2Q96HF1 295 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 SRSF8Q9BRL6 282 aaKnown RBP5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR51M1Q9H341 326 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 PRORYQ9H606 182 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 ZNF430Q9H8G1 570 aaPredicted RBP5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 TNFRSF18Q9Y5U5 241 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 DMXL2Q8TDJ6 3036 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 NBEAQ8NFP9 2946 aa5.67□□□□□ -1.5
SMARCAL1-212ENST00000486983 BAHCC1Q9P281 2608 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 DSCAMO60469 2012 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 TRBV20OR9-2A0A075B6H5 130 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 MDFIC2A0A1B0GVS7 189 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 TCRBV4S1A1TA0A5B7 111 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 IFITM10A6NMD0 228 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 CRYGCP07315 174 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 CRYGBP07316 175 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR10J4P0C629 311 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 C8orf88P0DMB2 117 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR10J1P30954 320 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 NDUFA6P56556 154 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 BPIFB3P59826 476 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 WT1-ASQ06250 92 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 SPATA31B1PQ5VZV4 182 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 TEX38Q6PEX7 206 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 MIR17HGQ75NE6 70 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 TMEM183AQ8IXX5 376 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 LY6G5BQ8NDX9 201 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR8B3Q8NGG8 313 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR4X1Q8NH49 305 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 OR8B2Q96RD0 313 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 SLC25A33Q9BSK2 321 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 CLEC7AQ9BXN2 247 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 MIOXQ9UGB7 285 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 PKD1L2Q7Z442 2459 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 ATMQ13315 3056 aa5.66□□□□□ -1.5
SMARCAL1-212ENST00000486983 DYSFO75923 2080 aa5.65□□□□□ -1.5
SMARCAL1-212ENST00000486983 A0A1W2PPQ1 181 aa5.65□□□□□ -1.5
SMARCAL1-212ENST00000486983 IGLC7A0M8Q6 106 aa5.65□□□□□ -1.5
SMARCAL1-212ENST00000486983 CYSRT1A8MQ03 144 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms