RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TGOLN2O43493 480 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 ATG12O94817 140 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 NDUFB6O95139 128 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 OR2C1O95371 312 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 IL7P13232 177 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 PGAM2P15259 253 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 CBLN1P23435 193 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 SPCS3P61009 180 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 IFITM3Q01628 133 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 DCTN2Q13561 401 aaKnown RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 RPEL1Q2QD12 228 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 C2orf83Q53S99 150 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 PYDC2Q56P42 97 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 SGPP2Q8IWX5 399 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 OR4A16Q8NH70 328 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 MRAPQ8TCY5 172 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 TMEM190Q8WZ59 177 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 EEF1AKMT3Q96AZ1 226 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 GPR146Q96CH1 333 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 BSCL2Q96G97 398 aaPredicted RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 C7orf50Q9BRJ6 194 aaKnown RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 CHRDL1Q9BU40 450 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 ELOVL1Q9BW60 279 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 TECRQ9NZ01 308 aaKnown RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 CACFD1Q9UGQ2 172 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 C14orf166Q9Y224 244 aaKnown RBP4.3□□□□□ -1.72
CUX1-208ENST00000485792 KCNIP3Q9Y2W7 256 aa4.3□□□□□ -1.72
CUX1-208ENST00000485792 IGHV3-21A0A0B4J1V1 117 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 A0A1B0GU03 582 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 CCDC160A6NGH7 325 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 NDUFA4O00483 81 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 SAP30O75446 220 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 NXPH3O95157 252 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 SFT2D2O95562 160 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 DEFA4P12838 97 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 FOLR2P14207 255 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 GP9P14770 177 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 FAUP35544 74 aaKnown RBP4.29□□□□□ -1.72
CUX1-208ENST00000485792 ARL3P36405 182 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 CCR6P51684 374 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 ATP5IP56385 69 aaPredicted RBP4.29□□□□□ -1.72
CUX1-208ENST00000485792 RAB25P57735 213 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 SRPXP78539 464 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 RBMS2Q15434 407 aaKnown RBP4.29□□□□□ -1.72
CUX1-208ENST00000485792 TATDN3Q17R31 274 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 CNPY1Q3B7I2 92 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 ANKRD55Q3KP44 614 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 TMEM268Q5VZI3 342 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 GSG1LQ6UXU4 331 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 LYZL2Q7Z4W2 148 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 SLC35G3Q8N808 338 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 SYT8Q8NBV8 401 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 TMEM116Q8NCL8 245 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 MARC2Q969Z3 335 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 OR4C12Q96R67 309 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 CCDC32Q9BV29 185 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 C21orf62Q9NYP8 219 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 MRPL27Q9P0M9 148 aaKnown RBP4.29□□□□□ -1.72
CUX1-208ENST00000485792 PEMTQ9UBM1 199 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 MLXQ9UH92 298 aa4.29□□□□□ -1.72
CUX1-208ENST00000485792 IGHV3OR16-8A0A075B7F1 116 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 TRAV25A0A0B4J276 109 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 PIGBOS1A0A0B4J2F0 54 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 C15orf62A8K5M9 175 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 MPTX1A8MV57 137 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 FAM90A26D6RGX4 464 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 PRSS46E5RG02 174 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 CORTO00230 105 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 CYB5BO43169 146 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 TMEM50AO95807 157 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 MT-CO2P00403 227 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 IGKV1-17P01599 117 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 IGHV3-48P01763 117 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
CUX1-208ENST00000485792 SULT1A3P0DMM9 295 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 SULT1A4P0DMN0 295 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 GPR183P32249 361 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 HTR2BP41595 481 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 AKR1C2P52895 323 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 MFAP4P55083 255 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 ERHP84090 104 aaKnown RBP4.28□□□□□ -1.72
CUX1-208ENST00000485792 TNFRSF9Q07011 255 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 PPP1R1AQ13522 171 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 SMCO1Q147U7 214 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 TRIM16LQ309B1 348 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 CD300EQ496F6 205 aaPredicted RBP4.28□□□□□ -1.72
CUX1-208ENST00000485792 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 SLC25A24Q6NUK1 477 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 LGI3Q8N145 548 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 OR4X1Q8NH49 305 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 RNASEH2CQ8TDP1 164 aaKnown RBP4.28□□□□□ -1.72
CUX1-208ENST00000485792 RRNAD1Q96FB5 475 aaKnown RBP4.28□□□□□ -1.72
CUX1-208ENST00000485792 FAM110AQ9BQ89 295 aa4.28□□□□□ -1.72
CUX1-208ENST00000485792 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms