RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 OPN1MWP04001 364 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 OPN1MW2P0DN77 364 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 OPN1MW3P0DN78 364 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 FHITP49789 147 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 ELLP55199 621 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-216ENST00000484087 DEFA5Q01523 94 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 AKR1C1Q04828 323 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 DIAPH2-AS1Q14236 149 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 PLGLAQ15195 96 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 ACOT6Q3I5F7 207 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-216ENST00000484087 C2orf83Q53S99 150 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 FFAR4Q5NUL3 377 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 TPTE2P1Q5T6R2 138 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 MINOS1Q5TGZ0 78 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 SVBPQ8N300 66 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 SEC11CQ9BY50 192 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 NPCDR1Q9BY65 106 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 ACTR3CQ9C0K3 210 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM231Q9H6L2 316 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 SLC39A9Q9NUM3 307 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 KIAA1456Q9P272 454 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 WDR83OSQ9Y284 106 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 MINOS1-NBL1R4GNA1 71 aa5.52□□□□□ -1.53
BRCA1-216ENST00000484087 IGHV3-72A0A0B4J1Y9 119 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TRAV1-1A0A0B4J248 108 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 A0A1B0GV50 99 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 A0A1B0GW64 132 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 RBFOX3A6NFN3 312 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 FAM229AH3BQW9 127 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 H3BUX3 64 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 SNAPINO95295 136 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 CA2P00918 260 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 CD5P06127 495 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TAGLN2P37802 199 aaKnown RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 IER3P46695 156 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 KRTAP10-3P60369 221 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TEPPQ6URK8 271 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 OR10G4Q8NGN3 311 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 OR10G9Q8NGN4 311 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 OR10G7Q8NGN6 311 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 ZNF430Q9H8G1 570 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 NDUFA4L2Q9NRX3 87 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 RPRMQ9NS64 109 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 C1RLQ9NZP8 487 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 METTL1Q9UBP6 276 aaKnown RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 SIGLEC9Q9Y336 463 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 FAM96BQ9Y3D0 163 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TBL2Q9Y4P3 447 aaKnown RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TET2Q6N021 2002 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 VWFP04275 2813 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 CTXND1A0A1B0GTU2 59 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 A0A1W2PPV4 95 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 MAP1LC3B2A6NCE7 125 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 ODF3BA8MYP8 253 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 LY6LH3BQJ8 138 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 IGLV2-23P01705 113 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 SFTA3P0C7M3 94 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 M6PRP20645 277 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 CD24P25063 80 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 GPX4P36969 197 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 OPRK1P41145 380 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 RPL27AP46776 148 aaKnown RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 COMPP49747 757 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 PPT1P50897 306 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 UBE2E1P51965 193 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 PSG5Q15238 335 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TNXAQ16473 311 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 PRSS8Q16651 343 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 ETFRF1Q6IPR1 90 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 PPP1R27Q86WC6 154 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 TMEM219Q86XT9 240 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 C3orf56Q8N813 242 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 RNASEH2CQ8TDP1 164 aaKnown RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 MBD3L1Q8WWY6 194 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 CACNG8Q8WXS5 425 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 SLC35E1Q96K37 410 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 MAP1LC3BQ9GZQ8 125 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 PRDM13Q9H4Q3 707 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 CARHSP1Q9Y2V2 147 aaKnown RBP5.51□□□□□ -1.53
BRCA1-216ENST00000484087 HILPDAQ9Y5L2 63 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 RFNGQ9Y644 331 aa5.51□□□□□ -1.53
BRCA1-216ENST00000484087 A0A1W2PPI3 338 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 PRSS46E5RG02 174 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 CORTO00230 105 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 TIMM23O14925 209 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 MT-CO2P00403 227 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 MOSP00540 346 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SNRNP70P08621 437 aaKnown RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 FBP1P09467 338 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 OR13C7P0DN81 318 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 RNASE2P10153 161 aaKnown RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 MYOD1P15172 320 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 BRS3P32247 399 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 CDC34P49427 236 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 SRSF3P84103 164 aaKnown RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 CD69Q07108 199 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 HES1Q14469 280 aa5.5□□□□□ -1.53
BRCA1-216ENST00000484087 HABP2Q14520 560 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-216ENST00000484087 HNF4GQ14541 408 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms