RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 ETV6P41212 452 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 SPCS2Q15005 226 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 DEFB135Q30KP9 77 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 OR4X1Q8NH49 305 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 RNASE11Q8TAA1 199 aaKnown RBP14.67□□□□□ -0.06
HPS4-213ENST00000483631 GLYATL2Q8WU03 294 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 RBPMSQ93062 196 aaKnown RBP14.67□□□□□ -0.06
HPS4-213ENST00000483631 RTBDNQ9BSG5 229 aaPredicted RBP14.67□□□□□ -0.06
HPS4-213ENST00000483631 TMEM231Q9H6L2 316 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 NAA60Q9H7X0 242 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 ZFAND3Q9H8U3 227 aa14.67□□□□□ -0.06
HPS4-213ENST00000483631 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.67□□□□□ -0.06
HPS4-213ENST00000483631 A0A0G2JRQ6 117 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 TEX13DA0A0J9YY54 714 aaPredicted RBP14.66□□□□□ -0.06
HPS4-213ENST00000483631 CLN5O75503 358 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 OR5AC1P0C628 307 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 AKAIN1P0CW23 69 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 TMBIM6P55061 237 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 LYG2Q86SG7 212 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 TMEM217Q8N7C4 229 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 DIRAS2Q96HU8 199 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 PRRT1Q99946 306 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 GPR132Q9UNW8 380 aa14.66□□□□□ -0.06
HPS4-213ENST00000483631 PUS1Q9Y606 427 aaKnown RBP eCLIP14.66□□□□□ -0.06
HPS4-213ENST00000483631 TRAV30A0A087WSZ9 112 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 A0A1W2PS18 150 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 DFFBO76075 338 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 HTR2BP41595 481 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 Q6ZRM9 215 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 TCF24Q7RTU0 167 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 DYNC2LI1Q8TCX1 351 aa14.65□□□□□ -0.06
HPS4-213ENST00000483631 IGHV3-49A0A0A0MS15 119 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 A0A0J9YWU9 116 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 RPS10-NUDT3A0A1W2PQS6 291 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 NUPR2A6NF83 97 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 CRYM-AS1A6NIL9 109 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 OPRK1P41145 380 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 IL18Q14116 193 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 CLVS1Q8IUQ0 354 aaPredicted RBP14.64□□□□□ -0.07
HPS4-213ENST00000483631 OR4C16Q8NGL9 310 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 GATAD1Q8WUU5 269 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 ST8SIA2Q92186 375 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 CSTL1Q9H114 145 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 FNDC4Q9H6D8 234 aaPredicted RBP14.64□□□□□ -0.07
HPS4-213ENST00000483631 TMEM56-RWDD3S4R434 201 aa14.64□□□□□ -0.07
HPS4-213ENST00000483631 A0A1B0GU03 582 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 MPTX1A8MV57 137 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 GSTZ1O43708 216 aaPredicted RBP14.63□□□□□ -0.07
HPS4-213ENST00000483631 RPL35AP18077 110 aaKnown RBP14.63□□□□□ -0.07
HPS4-213ENST00000483631 FAAP20Q6NZ36 180 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 APRG1Q8IVJ8 170 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 SELENOHQ8IZQ5 122 aaKnown RBP14.63□□□□□ -0.07
HPS4-213ENST00000483631 LHFPL5Q8TAF8 219 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 IL22RA2Q969J5 263 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 SCGB3A2Q96PL1 93 aa14.63□□□□□ -0.07
HPS4-213ENST00000483631 RSL24D1Q9UHA3 163 aaKnown RBP14.63□□□□□ -0.07
HPS4-213ENST00000483631 ANKRD20A5PA0PJZ0 165 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 NPPCP23582 126 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 TFPI2P48307 235 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 C2orf83Q53S99 150 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 RNASEH2CQ8TDP1 164 aaKnown RBP14.62□□□□□ -0.07
HPS4-213ENST00000483631 METTL26Q96S19 204 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 MS4A6AQ9H2W1 248 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 SCP2D1Q9UJQ7 156 aa14.62□□□□□ -0.07
HPS4-213ENST00000483631 PLECQ15149 4684 aaKnown RBP14.61□□□□□ -0.07
HPS4-213ENST00000483631 IGKV3-7A0A075B6H7 116 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 IGHV3OR16-13A0A075B7E8 117 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 IGHV3-74A0A0B4J1X5 117 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 SLC25A4P12235 298 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 CRYBB3P26998 211 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 NOXA1Q86UR1 476 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 HEYLQ9NQ87 328 aaPredicted RBP14.61□□□□□ -0.07
HPS4-213ENST00000483631 CACNG5Q9UF02 275 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 KCNIP3Q9Y2W7 256 aa14.61□□□□□ -0.07
HPS4-213ENST00000483631 ALMS1Q8TCU4 4167 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 CXorf65A6NEN9 183 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 DNASE2O00115 360 aaPredicted RBP14.6□□□□□ -0.07
HPS4-213ENST00000483631 IGKV1-17P01599 117 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 APOHP02749 345 aaPredicted RBP14.6□□□□□ -0.07
HPS4-213ENST00000483631 TMEM268Q5VZI3 342 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 LILRB2Q8N423 598 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 GBGT1Q8N5D6 347 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 OR51S1Q8NGJ8 323 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 GPR146Q96CH1 333 aa14.6□□□□□ -0.07
HPS4-213ENST00000483631 NARS2Q96I59 477 aaKnown RBP14.6□□□□□ -0.07
HPS4-213ENST00000483631 MRPL36Q9P0J6 103 aaKnown RBP14.6□□□□□ -0.07
HPS4-213ENST00000483631 PIGBOS1A0A0B4J2F0 54 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 ETFRF1Q6IPR1 90 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 SLC24A4Q8NFF2 622 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 OR1S2Q8NGQ3 325 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 TMEM230Q96A57 120 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 GRAMD2BQ96HH9 432 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 SOSTQ9BQB4 213 aa14.59□□□□□ -0.07
HPS4-213ENST00000483631 SLIRPQ9GZT3 109 aaKnown RBP14.59□□□□□ -0.07
HPS4-213ENST00000483631 NOL3O60936 208 aaKnown RBP14.58□□□□□ -0.08
HPS4-213ENST00000483631 SULT1A3P0DMM9 295 aa14.58□□□□□ -0.08
HPS4-213ENST00000483631 SULT1A4P0DMN0 295 aa14.58□□□□□ -0.08
HPS4-213ENST00000483631 YPEL3P61236 119 aaPredicted RBP14.58□□□□□ -0.08
HPS4-213ENST00000483631 EWSR1Q01844 656 aaKnown RBP eCLIP14.58□□□□□ -0.08
HPS4-213ENST00000483631 TMEM187Q14656 261 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms