RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 SLC35B1P78383 322 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 DIAPH2-AS1Q14236 149 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 ZNF833PQ6ZTB9 187 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 TGIF2LXQ8IUE1 241 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 TBX15Q96SF7 602 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 SNHG12Q9BXW3 62 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 TMEM106BQ9NUM4 274 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 BET1LQ9NYM9 111 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 ARL2-SNX15V9GYD0 113 aa12.05□□□□□ -0.48
ATG4B-220ENST00000482507 HIVEP3Q5T1R4 2406 aa12.04□□□□□ -0.48
ATG4B-220ENST00000482507 CD69Q07108 199 aa12.04□□□□□ -0.48
ATG4B-220ENST00000482507 LBHQ53QV2 105 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-220ENST00000482507 SLC35E1Q96K37 410 aa12.04□□□□□ -0.48
ATG4B-220ENST00000482507 FAM167A-AS1Q96KT0 104 aa12.04□□□□□ -0.48
ATG4B-220ENST00000482507 SLC25A33Q9BSK2 321 aa12.04□□□□□ -0.48
ATG4B-220ENST00000482507 TCL1AP56279 114 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 SELENOVP59797 346 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 TPTE2P1Q5T6R2 138 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 OR1L8Q8NGR8 309 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 OR5B3Q8NH48 314 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 IGF2BP2-AS1Q96M15 143 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 NDUFA4L2Q9NRX3 87 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 LINC00312Q9Y6C7 94 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 SPTBN1Q01082 2364 aaKnown RBP12.03□□□□□ -0.48
ATG4B-220ENST00000482507 hADV38S2A0JD32 116 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 CGB1A6NKQ9 187 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 FAM90A27PA6NNH2 459 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 ZNF705FA8MVS1 300 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-220ENST00000482507 H0YJW9 148 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 ZNF705DP0CH99 300 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-220ENST00000482507 ZNF705BP0CI00 300 aaPredicted RBP12.03□□□□□ -0.48
ATG4B-220ENST00000482507 ADORA2A-AS1P86434 159 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 C10orf55Q5SWW7 151 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 LINC00479Q96M42 142 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 HARBI1Q96MB7 349 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 HSPB9Q9BQS6 159 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 SLC25A2Q9BXI2 301 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 CHD6Q8TD26 2715 aa12.03□□□□□ -0.48
ATG4B-220ENST00000482507 IGHV3-48P01763 117 aa12.02□□□□□ -0.48
ATG4B-220ENST00000482507 PNKDQ8N490 385 aa12.02□□□□□ -0.48
ATG4B-220ENST00000482507 ATG101Q9BSB4 218 aa12.02□□□□□ -0.48
ATG4B-220ENST00000482507 GNB4Q9HAV0 340 aa12.02□□□□□ -0.48
ATG4B-220ENST00000482507 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
ATG4B-220ENST00000482507 FLNCQ14315 2725 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 C8orf88P0DMB2 117 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 GRNP28799 593 aaKnown RBP12.02□□□□□ -0.49
ATG4B-220ENST00000482507 TPPP2P59282 170 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 CX3CL1P78423 397 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 NHLRC2Q8NBF2 726 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 GNB1LQ9BYB4 327 aa12.02□□□□□ -0.49
ATG4B-220ENST00000482507 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-220ENST00000482507 ROS1P08922 2347 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 TNFSF4P23510 183 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 Q0VG73 95 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 TOMM20LQ6UXN7 152 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 BAGE3Q86Y29 109 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 BAGE2Q86Y30 109 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 OSTCQ9NRP0 149 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 CA1P00915 261 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-220ENST00000482507 IRF2P14316 349 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 COMPP49747 757 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-220ENST00000482507 PPOXP50336 477 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 PAFAH1B2P68402 229 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 TIGITQ495A1 244 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 TMEM200BQ69YZ2 307 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 OR5AN1Q8NGI8 311 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 OSR1Q8TAX0 266 aaPredicted RBP12.01□□□□□ -0.49
ATG4B-220ENST00000482507 FAM168AQ92567 244 aa12.01□□□□□ -0.49
ATG4B-220ENST00000482507 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
ATG4B-220ENST00000482507 A0A1W2PRE2 83 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 PYYP10082 97 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 NUTF2P61970 127 aaKnown RBP12□□□□□ -0.49
ATG4B-220ENST00000482507 RPL8P62917 257 aaKnown RBP12□□□□□ -0.49
ATG4B-220ENST00000482507 PATE2Q6UY27 113 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 SPOCK3Q9BQ16 436 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 COMMD5Q9GZQ3 224 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 JKAMPQ9P055 326 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 NAT8BQ9UHF3 227 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 NAV3Q8IVL0 2385 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 C16orf97H3BN30 126 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 MGST1P10620 155 aaKnown RBP12□□□□□ -0.49
ATG4B-220ENST00000482507 TAS2R45P59539 299 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 ADIPOQQ15848 244 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 TMEM30BQ3MIR4 351 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 RUSC1-AS1Q66K80 236 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 NUP37Q8NFH4 326 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 RCHY1Q96PM5 261 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 C19orf24Q9BVV8 132 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 MYO18BQ8IUG5 2567 aa12□□□□□ -0.49
ATG4B-220ENST00000482507 IGKV1D-37A0A075B6S9 117 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 DPRXA6NFQ7 191 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 ISLRO14498 428 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 ATP5IP56385 69 aaPredicted RBP11.99□□□□□ -0.49
ATG4B-220ENST00000482507 TMEM177Q53S58 311 aa11.99□□□□□ -0.49
ATG4B-220ENST00000482507 MRPL54Q6P161 138 aaKnown RBP11.99□□□□□ -0.49
ATG4B-220ENST00000482507 OR5AU1Q8NGC0 362 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms