RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 LYSTQ99698 3801 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 CXorf65A6NEN9 183 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 TMEM50AO95807 157 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 AKAIN1P0CW23 69 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 PAFAH1B2P68402 229 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 Q6ZRM9 215 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 FAM219AQ8IW50 185 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 LHFPL5Q8TAF8 219 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 RTBDNQ9BSG5 229 aaPredicted RBP16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 ZFAND3Q9H8U3 227 aa16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 CCDC59Q9P031 241 aaKnown RBP16.42■□□□□ 0.22
GPCPD1-206ENST00000481690 CDS2O95674 445 aa16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 APOHP02749 345 aaPredicted RBP16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 CMC4P56277 68 aaPredicted RBP16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 SURF2Q15527 256 aaPredicted RBP16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 FAM90A2PQ658T7 463 aa16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 PVRIGQ6DKI7 326 aa16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 DYNC2LI1Q8TCX1 351 aa16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 RBPMSQ93062 196 aaKnown RBP16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 RNF183Q96D59 192 aa16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 FNDC4Q9H6D8 234 aaPredicted RBP16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 MAP6D1Q9H9H5 199 aa16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 MRPL36Q9P0J6 103 aaKnown RBP16.41■□□□□ 0.22
GPCPD1-206ENST00000481690 A0A1B0GU03 582 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 CTDSPLO15194 276 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 SCGB2A1O75556 95 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 SPCS3P61009 180 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 RPL11P62913 178 aaKnown RBP16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 DHODHQ02127 395 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 TMEM268Q5VZI3 342 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 GLYATL2Q8WU03 294 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 CACNG5Q9UF02 275 aa16.4■□□□□ 0.22
GPCPD1-206ENST00000481690 DNASE2O00115 360 aaPredicted RBP16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 NOL3O60936 208 aaKnown RBP16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 CLN5O75503 358 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 DFFBO76075 338 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 CD5P06127 495 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 EWSR1Q01844 656 aaKnown RBP eCLIP16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 TNFRSF9Q07011 255 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 MLANAQ16655 118 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 SELENOHQ8IZQ5 122 aaKnown RBP16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 OR51S1Q8NGJ8 323 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 PRRT1Q99946 306 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 VSIRQ9H7M9 311 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 HEYLQ9NQ87 328 aaPredicted RBP16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 RABL2AQ9UBK7 228 aaPredicted RBP16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 RABL2BQ9UNT1 228 aa16.39■□□□□ 0.21
GPCPD1-206ENST00000481690 CRYM-AS1A6NIL9 109 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 TMBIM6P55061 237 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 LILRB2Q8N423 598 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 OR4X1Q8NH49 305 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 OR52E5Q8NH55 327 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 TMEM230Q96A57 120 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 GPR146Q96CH1 333 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 MS4A6AQ9H2W1 248 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 TMEM231Q9H6L2 316 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 GPR132Q9UNW8 380 aa16.38■□□□□ 0.21
GPCPD1-206ENST00000481690 CEBPZOSA8MTT3 80 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 NXPH3O95157 252 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 NPPCP23582 126 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 HTR2BP41595 481 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 RPL5P46777 297 aaKnown RBP16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 BSXQ3C1V8 233 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 BCL7BQ9BQE9 202 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 CSTL1Q9H114 145 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 RABAC1Q9UI14 185 aa16.37■□□□□ 0.21
GPCPD1-206ENST00000481690 RPS10-NUDT3A0A1W2PQS6 291 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 MPTX1A8MV57 137 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 TIGITQ495A1 244 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 AARDQ4LEZ3 155 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 METTL26Q96S19 204 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 MCUBQ9NWR8 336 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 PRR13Q9NZ81 148 aa16.36■□□□□ 0.21
GPCPD1-206ENST00000481690 ANKRD20A5PA0PJZ0 165 aa16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 NUPR2A6NF83 97 aa16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 GSTZ1O43708 216 aaPredicted RBP16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 DEFB131AP59861 70 aa16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 LEMD1Q68G75 181 aa16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 SLC24A4Q8NFF2 622 aa16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 RSL24D1Q9UHA3 163 aaKnown RBP16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 SCP2D1Q9UJQ7 156 aa16.35■□□□□ 0.21
GPCPD1-206ENST00000481690 A0A1W2PS18 150 aa16.34■□□□□ 0.21
GPCPD1-206ENST00000481690 TMEM217Q8N7C4 229 aa16.34■□□□□ 0.21
GPCPD1-206ENST00000481690 STXBP6Q8NFX7 210 aa16.34■□□□□ 0.21
GPCPD1-206ENST00000481690 NARS2Q96I59 477 aaKnown RBP16.34■□□□□ 0.21
GPCPD1-206ENST00000481690 TMEM56-RWDD3S4R434 201 aa16.34■□□□□ 0.21
GPCPD1-206ENST00000481690 TRAV30A0A087WSZ9 112 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 H3BMQ9 156 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 IGKV1-17P01599 117 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 P2RY1P47900 373 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 RND2P52198 227 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 C2orf83Q53S99 150 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 FAM24BQ8N5W8 94 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 SLIRPQ9GZT3 109 aaKnown RBP16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 KCNIP3Q9Y2W7 256 aa16.33■□□□□ 0.2
GPCPD1-206ENST00000481690 TRAV2A0A0B4J234 112 aa16.32■□□□□ 0.2
GPCPD1-206ENST00000481690 FABP12A6NFH5 140 aa16.32■□□□□ 0.2
GPCPD1-206ENST00000481690 CA1P00915 261 aaPredicted RBP16.32■□□□□ 0.2
GPCPD1-206ENST00000481690 SULT1A3P0DMM9 295 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms