RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 DHODHQ02127 395 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 RNASE12Q5GAN4 147 aaKnown RBP8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 OR4D10Q8NGI6 311 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 OR4X1Q8NH49 305 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 RNASE11Q8TAA1 199 aaKnown RBP8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 RBPMSQ93062 196 aaKnown RBP8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 CSTL1Q9H114 145 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 ZFAND3Q9H8U3 227 aa8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 PUS1Q9Y606 427 aaKnown RBP eCLIP8.96□□□□□ -0.98
SQSTM1-207ENST00000481335 CXorf65A6NEN9 183 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 MPTX1A8MV57 137 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 OPRK1P41145 380 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 HTR2BP41595 481 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 ALDH3B2P48448 385 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 IZUMO4Q1ZYL8 232 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 TCF24Q7RTU0 167 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 MARCH1Q8TCQ1 289 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 RAB2BQ8WUD1 216 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 NARS2Q96I59 477 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 PRRT1Q99946 306 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 KRTAP17-1Q9BYP8 105 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 MIXL1Q9H2W2 232 aa8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 CCDC59Q9P031 241 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 KLK5Q9Y337 293 aaPredicted RBP8.95□□□□□ -0.98
SQSTM1-207ENST00000481335 PIGBOS1A0A0B4J2F0 54 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 TEX13DA0A0J9YY54 714 aaPredicted RBP8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 IGHV3-48P01763 117 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 OR5AC1P0C628 307 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 AKAIN1P0CW23 69 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 RPL35AP18077 110 aaKnown RBP8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 NPPCP23582 126 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 ETV6P41212 452 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 TMEM41BQ5BJD5 291 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 SPINK9Q5DT21 86 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 NOXA1Q86UR1 476 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 APRG1Q8IVJ8 170 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 RNASEH2CQ8TDP1 164 aaKnown RBP8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 GLYATL2Q8WU03 294 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 ST8SIA2Q92186 375 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 IL22RA2Q969J5 263 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 METTL26Q96S19 204 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 C11orf68Q9H3H3 251 aaKnown RBP8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 NAA60Q9H7X0 242 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 HYDINQ4G0P3 5121 aa8.94□□□□□ -0.98
SQSTM1-207ENST00000481335 A0A0G2JRQ6 117 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 CRYM-AS1A6NIL9 109 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 DNASE2O00115 360 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 SLC25A4P12235 298 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 CRYBB3P26998 211 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 EIF2B2P49770 351 aaKnown RBP8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 SP6Q3SY56 376 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 C2orf83Q53S99 150 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 CEMP1Q6PRD7 247 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 GRAMD2BQ96HH9 432 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 SCGB3A2Q96PL1 93 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 RTBDNQ9BSG5 229 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 MFFQ9GZY8 342 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 MS4A6AQ9H2W1 248 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 FNDC4Q9H6D8 234 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 GPR132Q9UNW8 380 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 TMEM56-RWDD3S4R434 201 aa8.93□□□□□ -0.98
SQSTM1-207ENST00000481335 IGHV3-49A0A0A0MS15 119 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 A0A1B0GU03 582 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 CTDSP2O14595 271 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 GSTZ1O43708 216 aaPredicted RBP8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 TFPI2P48307 235 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 TMBIM6P55061 237 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 IL18Q14116 193 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 SPCS2Q15005 226 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 ETFRF1Q6IPR1 90 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 SLC24A4Q8NFF2 622 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 OR4C16Q8NGL9 310 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 OR1S2Q8NGQ3 325 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 DIRAS2Q96HU8 199 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 RSL24D1Q9UHA3 163 aaKnown RBP8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 SCP2D1Q9UJQ7 156 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 KCNIP3Q9Y2W7 256 aa8.92□□□□□ -0.98
SQSTM1-207ENST00000481335 EPPK1P58107 5090 aaKnown RBP8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 IGKV3-7A0A075B6H7 116 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 IGHV3OR16-13A0A075B7E8 117 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 IGHV3-74A0A0B4J1X5 117 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 ANKRD20A5PA0PJZ0 165 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 IGKV1-17P01599 117 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 YPEL3P61236 119 aaPredicted RBP8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 SRPXP78539 464 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 TMEM268Q5VZI3 342 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 Q6ZRM9 215 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 SELENOHQ8IZQ5 122 aaKnown RBP8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 GBGT1Q8N5D6 347 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 DYNC2LI1Q8TCX1 351 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 TMEM230Q96A57 120 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 RARRES2Q99969 163 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 HEYLQ9NQ87 328 aaPredicted RBP8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 CACNG5Q9UF02 275 aa8.91□□□□□ -0.98
SQSTM1-207ENST00000481335 HELTA6NFD8 242 aa8.9□□□□□ -0.98
SQSTM1-207ENST00000481335 K7EQG2 157 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms