RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 SLURP1P55000 103 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 OR2B8PP59922 312 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 PRCDQ00LT1 54 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 LGALSLQ3ZCW2 172 aaPredicted RBP9.43□□□□□ -0.9
PTPRF-213ENST00000481019 TMUB2Q71RG4 321 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 C9orf62Q8N4C0 152 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 TTC9CQ8N5M4 171 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 MAGT1Q9H0U3 335 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 OR5AC2Q9NZP5 309 aa9.43□□□□□ -0.9
PTPRF-213ENST00000481019 BORCS7-ASMTA0A0B4J1R7 106 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 TEX50A0A1B0GTY4 177 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 JTBO76095 146 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 HTR2BP41595 481 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 SULT1A1P50225 295 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 NKX2-5P52952 324 aaPredicted RBP9.42□□□□□ -0.9
PTPRF-213ENST00000481019 ATP6V1FQ16864 119 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 EIF5AL1Q6IS14 154 aaKnown RBP9.42□□□□□ -0.9
PTPRF-213ENST00000481019 SLC51BQ86UW2 128 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 OR10W1Q8NGF6 305 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 OR1L6Q8NGR2 347 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 PINX1Q96BK5 328 aaKnown RBP9.42□□□□□ -0.9
PTPRF-213ENST00000481019 ARPC5LQ9BPX5 153 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 DMRT1Q9Y5R6 373 aa9.42□□□□□ -0.9
PTPRF-213ENST00000481019 TRBV9A0A0B4J1U6 114 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 IGLC7A0M8Q6 106 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 ANKRD34BA5PLL1 514 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 H3BUA1 57 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 DFFBO76075 338 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 BRI3O95415 125 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 IFNA10P01566 189 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 ZNF616Q08AN1 781 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 ZNF266Q14584 549 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 OPCMLQ14982 345 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 SPANXN5Q5MJ07 72 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 TMEM252Q8N6L7 170 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 OR10P1Q8NGE3 313 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 DLX4Q92988 240 aaPredicted RBP9.41□□□□□ -0.9
PTPRF-213ENST00000481019 RCC1LQ96I51 464 aaKnown RBP9.41□□□□□ -0.9
PTPRF-213ENST00000481019 TMEM68Q96MH6 324 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 FANCD2OSQ96PS1 177 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 HINT2Q9BX68 163 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 SLA2Q9H6Q3 261 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 NDUFA4L2Q9NRX3 87 aa9.41□□□□□ -0.9
PTPRF-213ENST00000481019 RNF222A6NCQ9 220 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 NPIPB5A8MRT5 1133 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 BCL2L11O43521 198 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 OR2J3O76001 311 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 NXPH3O95157 252 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 NDUFB8O95169 186 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 CRYGCP07315 174 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 OR8U8P0C7N1 319 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 IAPPP10997 89 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 CXCL2P19875 107 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 RHOGP84095 191 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 LAMTOR1Q6IAA8 161 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 OR1S2Q8NGQ3 325 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 C11orf1Q9H5F2 150 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
PTPRF-213ENST00000481019 S4R3C0 116 aa9.4□□□□□ -0.9
PTPRF-213ENST00000481019 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 LINC01619G3V211 115 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 IFNA5P01569 189 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 IGHV3-23P01764 117 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 HSPB1P04792 205 aaKnown RBP9.39□□□□□ -0.91
PTPRF-213ENST00000481019 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
PTPRF-213ENST00000481019 CTRB1P17538 263 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 MFAP2P55001 183 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 PAX9P55771 341 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
PTPRF-213ENST00000481019 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 CTRB2Q6GPI1 263 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 ZNF343Q6P1L6 599 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 TMEM14EPQ6UXP3 125 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 SLC24A4Q8NFF2 622 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 GGACTQ9BVM4 153 aa9.39□□□□□ -0.91
PTPRF-213ENST00000481019 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
PTPRF-213ENST00000481019 CORTO00230 105 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 IFNA7P01567 189 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 IFNA4P05014 189 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 NPY1RP25929 384 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 EXOSC2Q13868 293 aaKnown RBP9.38□□□□□ -0.91
PTPRF-213ENST00000481019 KLK9Q2XQG4 91 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 C2orf83Q53S99 150 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 DPF1Q92782 380 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 ZNF471Q9BX82 626 aaPredicted RBP9.38□□□□□ -0.91
PTPRF-213ENST00000481019 KLK9Q9UKQ9 250 aa9.38□□□□□ -0.91
PTPRF-213ENST00000481019 IGLV11-55A0A075B6I3 123 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 WI2-2373I1.2A0A1W2PRP0 233 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 SEC14L6B5MCN3 397 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 FNDC10F2Z333 226 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 BMPR1BO00238 502 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 TMEM50AO95807 157 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 C15orf32Q32M92 178 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 SPINK9Q5DT21 86 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 ETFRF1Q6IPR1 90 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 SLC25A24Q6NUK1 477 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 ZNF767PQ75MW2 155 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 LILRB2Q8N423 598 aa9.37□□□□□ -0.91
PTPRF-213ENST00000481019 UBAC2Q8NBM4 344 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms