RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TEX13DA0A0J9YY54 714 aaPredicted RBP12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 DEFB4AO15263 64 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 LY6G6CO95867 125 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 DEFB131AP59861 70 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 IL18Q14116 193 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 TIGITQ495A1 244 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 ZNF600Q6ZNG1 722 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 MS4A6AQ9H2W1 248 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 ENY2Q9NPA8 101 aa12.79□□□□□ -0.36
ECHDC1-216ENST00000479525 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 NPBWR1P48145 328 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 SELENOHQ8IZQ5 122 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 GLYATL2Q8WU03 294 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 GPR146Q96CH1 333 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 DIRAS2Q96HU8 199 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 GINS3Q9BRX5 216 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 NAA60Q9H7X0 242 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 CACNG5Q9UF02 275 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 RABAC1Q9UI14 185 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 C14orf166Q9Y224 244 aaKnown RBP12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 TP53TG1Q9Y2A0 90 aa12.78□□□□□ -0.36
ECHDC1-216ENST00000479525 TBPP20226 339 aa12.77□□□□□ -0.37
ECHDC1-216ENST00000479525 TMEM268Q5VZI3 342 aa12.77□□□□□ -0.37
ECHDC1-216ENST00000479525 LINC00476Q8WZB0 136 aa12.77□□□□□ -0.37
ECHDC1-216ENST00000479525 TMEM222Q9H0R3 208 aa12.77□□□□□ -0.37
ECHDC1-216ENST00000479525 VSIRQ9H7M9 311 aa12.77□□□□□ -0.37
ECHDC1-216ENST00000479525 KIR2DL5BA0A0G2JN68 375 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 KIR2DL5BA0A0G2JPC4 375 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 UBE2CO00762 179 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 GSG1LQ6UXU4 331 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 KIR2DL5AQ8N109 375 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 STXBP6Q8NFX7 210 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 OR51S1Q8NGJ8 323 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 SMIM4Q8WVI0 70 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 CSTL1Q9H114 145 aa12.76□□□□□ -0.37
ECHDC1-216ENST00000479525 KMT2AQ03164 3969 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 DISC1C4P0D8 188 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 CLN5O75503 358 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 ATG12O94817 140 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 CA1P00915 261 aaPredicted RBP12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 AKAIN1P0CW23 69 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 RBMS2Q15434 407 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 PVRIGQ6DKI7 326 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 DYNC2LI1Q8TCX1 351 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 TMEM230Q96A57 120 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 HEYLQ9NQ87 328 aaPredicted RBP12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 GPR132Q9UNW8 380 aa12.75□□□□□ -0.37
ECHDC1-216ENST00000479525 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 CEBPZOSA8MTT3 80 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 MPTX1A8MV57 137 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 INS-IGF2F8WCM5 200 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 CDS2O95674 445 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 RND2P52198 227 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 NANOS2P60321 138 aaKnown RBP12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 SPCS3P61009 180 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 RBPMSQ93062 196 aaKnown RBP12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 RARRES2Q99969 163 aa12.74□□□□□ -0.37
ECHDC1-216ENST00000479525 CRYM-AS1A6NIL9 109 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 IGKV1-17P01599 117 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 ZNF688P0C7X2 276 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 NPPCP23582 126 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 PAFAH1B2P68402 229 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 BSXQ3C1V8 233 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 CEMP1Q6PRD7 247 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 FBXL17Q9UF56 701 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 FRAS1Q86XX4 4008 aa12.73□□□□□ -0.37
ECHDC1-216ENST00000479525 NUPR2A6NF83 97 aa12.72□□□□□ -0.37
ECHDC1-216ENST00000479525 CORTO00230 105 aa12.72□□□□□ -0.37
ECHDC1-216ENST00000479525 P2RY1P47900 373 aa12.72□□□□□ -0.37
ECHDC1-216ENST00000479525 C15orf40Q8WUR7 153 aa12.72□□□□□ -0.37
ECHDC1-216ENST00000479525 MCUBQ9NWR8 336 aa12.72□□□□□ -0.37
ECHDC1-216ENST00000479525 PRSS54Q6PEW0 395 aa12.71□□□□□ -0.37
ECHDC1-216ENST00000479525 SLC24A4Q8NFF2 622 aa12.71□□□□□ -0.37
ECHDC1-216ENST00000479525 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
ECHDC1-216ENST00000479525 ACY3Q96HD9 319 aa12.71□□□□□ -0.37
ECHDC1-216ENST00000479525 METTL26Q96S19 204 aa12.71□□□□□ -0.37
ECHDC1-216ENST00000479525 CCDC59Q9P031 241 aaKnown RBP12.71□□□□□ -0.37
ECHDC1-216ENST00000479525 ANKRD20A5PA0PJZ0 165 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 K7EQG2 157 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 DEDDO75618 318 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 IGLC1P0CG04 106 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 AKR1C4P17516 323 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 CRYBB3P26998 211 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 HTR2BP41595 481 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 TMEM187Q14656 261 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 STHQ8IWL8 128 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 CLEC5AQ9NY25 188 aa12.7□□□□□ -0.38
ECHDC1-216ENST00000479525 H3BMQ9 156 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 C4BPBP20851 252 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 OR10J1P30954 320 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 DHODHQ02127 395 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms