RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 A8MWP6 167 aa15.59■□□□□ 0.09
VARS-224ENST00000479051 F8W735 103 aaPredicted RBP15.59■□□□□ 0.09
VARS-224ENST00000479051 NDUFA4O00483 81 aa15.59■□□□□ 0.09
VARS-224ENST00000479051 IGHV3-48P01763 117 aa15.59■□□□□ 0.09
VARS-224ENST00000479051 OR52B4Q8NGK2 314 aa15.59■□□□□ 0.09
VARS-224ENST00000479051 CIB3Q96Q77 187 aaPredicted RBP15.59■□□□□ 0.09
VARS-224ENST00000479051 CHRDL1Q9BU40 450 aa15.59■□□□□ 0.09
VARS-224ENST00000479051 CTSGP08311 255 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 ELLP55199 621 aaPredicted RBP15.58■□□□□ 0.08
VARS-224ENST00000479051 RPP30P78346 268 aaKnown RBP15.58■□□□□ 0.08
VARS-224ENST00000479051 IFITM3Q01628 133 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 LCN12Q6JVE5 192 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 HAPLN4Q86UW8 402 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 OR2K2Q8NGT1 345 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 ZNF431Q8TF32 576 aaPredicted RBP15.58■□□□□ 0.08
VARS-224ENST00000479051 TMEM190Q8WZ59 177 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 MARC2Q969Z3 335 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 PRR25Q96S07 402 aa15.58■□□□□ 0.08
VARS-224ENST00000479051 K7EIL1 84 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 WRBO00258 174 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 SYNGR2O43760 224 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 SLC25A4P12235 298 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 FOLR2P14207 255 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 SPNP16150 400 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 ADMP35318 185 aa15.57■□□□□ 0.08
VARS-224ENST00000479051 TECRQ9NZ01 308 aaKnown RBP15.57■□□□□ 0.08
VARS-224ENST00000479051 TMEM213A2RRL7 107 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 IFNA4P05014 189 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 GP9P14770 177 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 CBLN1P23435 193 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 NKX2-1P43699 371 aaPredicted RBP15.56■□□□□ 0.08
VARS-224ENST00000479051 RAB11AP62491 216 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 DEFB121Q5J5C9 76 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 UNQ9165/PRO28630Q6UXU0 137 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 UXS1Q8NBZ7 420 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 OR4X1Q8NH49 305 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 SEC22CQ9BRL7 303 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 C20orf24Q9BUV8 137 aa15.56■□□□□ 0.08
VARS-224ENST00000479051 FNDC4Q9H6D8 234 aaPredicted RBP15.56■□□□□ 0.08
VARS-224ENST00000479051 DAZ1Q9NQZ3 744 aaKnown RBP15.56■□□□□ 0.08
VARS-224ENST00000479051 TRAV30A0A087WSZ9 112 aa15.55■□□□□ 0.08
VARS-224ENST00000479051 CLN5O75503 358 aa15.55■□□□□ 0.08
VARS-224ENST00000479051 YIF1AO95070 293 aa15.55■□□□□ 0.08
VARS-224ENST00000479051 IAPPP10997 89 aa15.55■□□□□ 0.08
VARS-224ENST00000479051 IAH1Q2TAA2 248 aaPredicted RBP15.55■□□□□ 0.08
VARS-224ENST00000479051 C12orf45Q8N5I9 185 aaPredicted RBP15.55■□□□□ 0.08
VARS-224ENST00000479051 MAGT1Q9H0U3 335 aa15.55■□□□□ 0.08
VARS-224ENST00000479051 GPN1Q9HCN4 374 aaPredicted RBP15.55■□□□□ 0.08
VARS-224ENST00000479051 MRPL27Q9P0M9 148 aaKnown RBP15.55■□□□□ 0.08
VARS-224ENST00000479051 DNAH3Q8TD57 4116 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 MPTX1A8MV57 137 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 TMEM50AO95807 157 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 IL5P05113 134 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 TM4SF20Q53R12 229 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 C11orf87Q6NUJ2 197 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 ZNF600Q6ZNG1 722 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 NRARPQ7Z6K4 114 aa15.54■□□□□ 0.08
VARS-224ENST00000479051 PAIP2BQ9ULR5 123 aaKnown RBP15.54■□□□□ 0.08
VARS-224ENST00000479051 SORL1Q92673 2214 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 C15orf62A8K5M9 175 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 K7EMT4 169 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 DEFB114Q30KQ6 69 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 ADAMTSL5Q6ZMM2 481 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 TMEM170AQ8WVE7 144 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 CACNG8Q8WXS5 425 aa15.53■□□□□ 0.08
VARS-224ENST00000479051 PRAF2O60831 178 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 RND2P52198 227 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 ID3Q02535 119 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 CD69Q07108 199 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 MLANAQ16655 118 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 CD300EQ496F6 205 aaPredicted RBP15.52■□□□□ 0.08
VARS-224ENST00000479051 PRSS54Q6PEW0 395 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 SLC16A13Q7RTY0 426 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 ZBTB8BQ8NAP8 495 aaPredicted RBP15.52■□□□□ 0.08
VARS-224ENST00000479051 OR4D5Q8NGN0 318 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 GINS3Q9BRX5 216 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 GSKIPQ9P0R6 139 aa15.52■□□□□ 0.08
VARS-224ENST00000479051 C5orf51A6NDU8 294 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 FAM25EA8MYX2 175 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 INMT-MINDY4F8WBC2 141 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 SCGB1D2O95969 90 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 C8orf88P0DMB2 117 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 GPX4P36969 197 aaPredicted RBP15.51■□□□□ 0.07
VARS-224ENST00000479051 POLR2GP62487 172 aaKnown RBP eCLIP15.51■□□□□ 0.07
VARS-224ENST00000479051 TMEM116Q8NCL8 245 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 OR1S2Q8NGQ3 325 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 SLC35E1Q96K37 410 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 OR10C1Q96KK4 312 aa15.51■□□□□ 0.07
VARS-224ENST00000479051 MRPL36Q9P0J6 103 aaKnown RBP15.51■□□□□ 0.07
VARS-224ENST00000479051 STRAPQ9Y3F4 350 aaKnown RBP15.51■□□□□ 0.07
VARS-224ENST00000479051 CCSO14618 274 aa15.5■□□□□ 0.07
VARS-224ENST00000479051 EDN2P20800 178 aa15.5■□□□□ 0.07
VARS-224ENST00000479051 BMI1P35226 326 aa15.5■□□□□ 0.07
VARS-224ENST00000479051 SPANXN5Q5MJ07 72 aa15.5■□□□□ 0.07
VARS-224ENST00000479051 GTSCR1Q86UQ5 136 aa15.5■□□□□ 0.07
VARS-224ENST00000479051 ACY3Q96HD9 319 aa15.5■□□□□ 0.07
VARS-224ENST00000479051 PUS1Q9Y606 427 aaKnown RBP eCLIP15.5■□□□□ 0.07
VARS-224ENST00000479051 IGHV3OR16-8A0A075B7F1 116 aa15.49■□□□□ 0.07
VARS-224ENST00000479051 SSSCA1O60232 199 aa15.49■□□□□ 0.07
VARS-224ENST00000479051 OR10J1P30954 320 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms