RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 TNFAIP8L2Q6P589 184 aaPredicted RBP2.93□□□□□ -1.94
CCDC171-207ENST00000478913 MBOAT2Q6ZWT7 520 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 SYS1Q8N2H4 156 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 ZFP41Q8N8Y5 198 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 BPIFCQ8NFQ6 507 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 OR5J2Q8NH18 312 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 UBALD1Q8TB05 177 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 RASD2Q96D21 266 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 SCGB3A2Q96PL1 93 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 OR2A7Q96R45 310 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 PFDN5Q99471 154 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 S100A13Q99584 98 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 RARRES2Q99969 163 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF471Q9BX82 626 aaPredicted RBP2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM59Q9BXS4 323 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 ALX4Q9H161 411 aaPredicted RBP2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM185BQ9H7F4 350 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM27Q9HBJ8 222 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 BCL2L10Q9HD36 194 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 HRASLSQ9HDD0 168 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 CKLFQ9UBR5 152 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 KPTNQ9Y664 436 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF780BQ9Y6R6 833 aa2.93□□□□□ -1.94
CCDC171-207ENST00000478913 ANKRD20A5PA0PJZ0 165 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 C17orf51A8MQB3 221 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 TSTD3H0UI37 97 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 DNASE2O00115 360 aaPredicted RBP2.92□□□□□ -1.94
CCDC171-207ENST00000478913 TAAR5O14804 337 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 CYB5AP00167 134 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 LIMS3P0CW19 117 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 LIMS4P0CW20 117 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SLC25A4P12235 298 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 ZNF35P13682 527 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 CSNK2A2P19784 350 aaPredicted RBP2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PAX6P26367 422 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 CD34P28906 385 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PYCR1P32322 319 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PRSS3P35030 304 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SSR2P43308 183 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SRP9P49458 86 aaKnown RBP2.92□□□□□ -1.94
CCDC171-207ENST00000478913 NCBP2P52298 156 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC171-207ENST00000478913 KRTAP10-1P60331 282 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 RAB8AP61006 207 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PRB3Q04118 309 aaPredicted RBP2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SSX2Q16385 188 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SLC36A2Q495M3 483 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 C6orf226Q5I0X4 101 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 TEX30Q5JUR7 227 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SAPCD1Q5SSQ6 148 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 LINC00173Q6ZV60 143 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 HIST2H3AQ71DI3 136 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 LYG2Q86SG7 212 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 C10orf111Q8N326 155 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 KCNRGQ8N5I3 272 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 COMMD1Q8N668 190 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 OR1L6Q8NGR2 347 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 OR6N1Q8NGY5 312 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 OR2T27Q8NH04 317 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 GLYATL2Q8WU03 294 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SFT2D1Q8WV19 159 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 MITD1Q8WV92 249 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 GHSRQ92847 366 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 RAD51AP1Q96B01 352 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SMIM19Q96E16 107 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 MRPS24Q96EL2 167 aaKnown RBP2.92□□□□□ -1.94
CCDC171-207ENST00000478913 WDR34Q96EX3 536 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PRAP1Q96NZ9 151 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PHB2Q99623 299 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PRRT1Q99946 306 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PBDC1Q9BVG4 233 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SEC11CQ9BY50 192 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 PKIBQ9C010 78 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 OR51V1Q9H2C8 321 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 OR51M1Q9H341 326 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 RGCCQ9H4X1 137 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 NIT2Q9NQR4 276 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 RASL12Q9NYN1 266 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 GNG8Q9UK08 70 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SLC35A3Q9Y2D2 325 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 MED31Q9Y3C7 131 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 SLC22A7Q9Y694 548 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 TMEM14AQ9Y6G1 99 aa2.92□□□□□ -1.94
CCDC171-207ENST00000478913 A0A0A6YYH2 397 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 A0A0B4J2A0 478 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 TVP23AA6NH52 213 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 A6NJ64 397 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CPSF4LA6NMK7 179 aaKnown RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 IFITM5A6NNB3 132 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 HMGN4O00479 90 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 SOX15O60248 233 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CNIH1O95406 144 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 SIX6O95475 246 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 C1orf105O95561 183 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 RAB3DO95716 219 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CFDP00746 253 aaPredicted RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 IFNA10P01566 189 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 MT-ND4LP03901 98 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 DBIP07108 87 aaKnown RBP2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CRYGCP07315 174 aa2.91□□□□□ -1.94
CCDC171-207ENST00000478913 CECR9P0C854 216 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms