RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 PDCD10Q9BUL8 212 aa16.08■□□□□ 0.16
MCF2L2-210ENST00000478652 MS4A6AQ9H2W1 248 aa16.08■□□□□ 0.16
MCF2L2-210ENST00000478652 OR5AC1P0C628 307 aa16.07■□□□□ 0.16
MCF2L2-210ENST00000478652 CMC4P56277 68 aaPredicted RBP16.07■□□□□ 0.16
MCF2L2-210ENST00000478652 LEMD1Q68G75 181 aa16.07■□□□□ 0.16
MCF2L2-210ENST00000478652 STEAP1BQ6NZ63 245 aa16.07■□□□□ 0.16
MCF2L2-210ENST00000478652 CTDSP2O14595 271 aa16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 ATG12O94817 140 aa16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 OPRK1P41145 380 aa16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 DEFB131AP59861 70 aa16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 BSXQ3C1V8 233 aa16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 RNASE11Q8TAA1 199 aaKnown RBP16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 RRNAD1Q96FB5 475 aaKnown RBP16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 RARRES2Q99969 163 aa16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 RTBDNQ9BSG5 229 aaPredicted RBP16.06■□□□□ 0.16
MCF2L2-210ENST00000478652 GABARAPH6UMI1 98 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 CORTO00230 105 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 CLN5O75503 358 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 PAFAH1B2P68402 229 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 SPCS2Q15005 226 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 TMEM217Q8N7C4 229 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 GLYATL2Q8WU03 294 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 GATAD1Q8WUU5 269 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 PHLDA1Q8WV24 401 aaPredicted RBP16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 TMEM222Q9H0R3 208 aa16.05■□□□□ 0.16
MCF2L2-210ENST00000478652 KMT2AQ03164 3969 aa16.04■□□□□ 0.16
MCF2L2-210ENST00000478652 DNASE2O00115 360 aaPredicted RBP16.04■□□□□ 0.16
MCF2L2-210ENST00000478652 SUB1P53999 127 aaKnown RBP eCLIP16.04■□□□□ 0.16
MCF2L2-210ENST00000478652 RPL11P62913 178 aaKnown RBP16.04■□□□□ 0.16
MCF2L2-210ENST00000478652 ENY2Q9NPA8 101 aa16.04■□□□□ 0.16
MCF2L2-210ENST00000478652 RGS5O15539 181 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 CDS2O95674 445 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 CA1P00915 261 aaPredicted RBP16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 IGKV1-17P01599 117 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 CD5P06127 495 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 TIGITQ495A1 244 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 AARDQ4LEZ3 155 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 OR11H2Q8NH07 326 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 OR4X1Q8NH49 305 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 C15orf40Q8WUR7 153 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 RABAC1Q9UI14 185 aa16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 KLK5Q9Y337 293 aaPredicted RBP16.03■□□□□ 0.16
MCF2L2-210ENST00000478652 DEFB4AO15263 64 aa16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 NPPCP23582 126 aa16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 RPL5P46777 297 aaKnown RBP16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 ALDH3B2P48448 385 aa16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 NANOS2P60321 138 aaKnown RBP16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 SELENOHQ8IZQ5 122 aaKnown RBP16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 SMIM4Q8WVI0 70 aa16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 NAA60Q9H7X0 242 aa16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 CACNG5Q9UF02 275 aa16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 C14orf166Q9Y224 244 aaKnown RBP16.02■□□□□ 0.16
MCF2L2-210ENST00000478652 TRAV2A0A0B4J234 112 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 TEX13DA0A0J9YY54 714 aaPredicted RBP16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 K7EQG2 157 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 CRYBB3P26998 211 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 P2RY1P47900 373 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 SPCS3P61009 180 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 SSBP1Q04837 148 aaKnown RBP16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 MEF2DQ14814 521 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 STXBP6Q8NFX7 210 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 OR4C16Q8NGL9 310 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 RBPMSQ93062 196 aaKnown RBP16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 GPR146Q96CH1 333 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 METTL26Q96S19 204 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 C11orf68Q9H3H3 251 aaKnown RBP16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 TMEM231Q9H6L2 316 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 FRAS1Q86XX4 4008 aa16.01■□□□□ 0.15
MCF2L2-210ENST00000478652 B3GALNT1O75752 331 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 NXPH3O95157 252 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 RBMS2Q15434 407 aaKnown RBP16■□□□□ 0.15
MCF2L2-210ENST00000478652 GPR141Q7Z602 305 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 FAM219AQ8IW50 185 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 RPP25LQ8N5L8 163 aaKnown RBP16■□□□□ 0.15
MCF2L2-210ENST00000478652 OR52E5Q8NH55 327 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 TMEM170AQ8WVE7 144 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 MRPS26Q9BYN8 205 aaKnown RBP16■□□□□ 0.15
MCF2L2-210ENST00000478652 CTNNBIP1Q9NSA3 81 aaPredicted RBP16■□□□□ 0.15
MCF2L2-210ENST00000478652 PRR13Q9NZ81 148 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 GPR132Q9UNW8 380 aa16■□□□□ 0.15
MCF2L2-210ENST00000478652 GIG44P09565 113 aaPredicted RBP15.99■□□□□ 0.15
MCF2L2-210ENST00000478652 MRPS10P82664 201 aaKnown RBP15.99■□□□□ 0.15
MCF2L2-210ENST00000478652 TMEM268Q5VZI3 342 aa15.99■□□□□ 0.15
MCF2L2-210ENST00000478652 TMEM230Q96A57 120 aa15.99■□□□□ 0.15
MCF2L2-210ENST00000478652 FBXL17Q9UF56 701 aa15.99■□□□□ 0.15
MCF2L2-210ENST00000478652 A0A1W2PS18 150 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 CRYM-AS1A6NIL9 109 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 DISC1C4P0D8 188 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 DEDDO75618 318 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 ZNF688P0C7X2 276 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 IGLC1P0CG04 106 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 AKAIN1P0CW23 69 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 HTR2BP41595 481 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 RND2P52198 227 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 TMEM187Q14656 261 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 SURF2Q15527 256 aaPredicted RBP15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 PRSS54Q6PEW0 395 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 TRPT1Q86TN4 253 aaKnown RBP15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 C11orf45Q8TAV5 145 aa15.98■□□□□ 0.15
MCF2L2-210ENST00000478652 DCANP1Q8TF63 244 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms