RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 OR5AC1P0C628 307 aa16.81■□□□□ 0.28
C9orf3-216ENST00000478603 SUB1P53999 127 aaKnown RBP eCLIP16.81■□□□□ 0.28
C9orf3-216ENST00000478603 LHFPL5Q8TAF8 219 aa16.81■□□□□ 0.28
C9orf3-216ENST00000478603 C6orf62Q9GZU0 229 aaPredicted RBP16.81■□□□□ 0.28
C9orf3-216ENST00000478603 VSIRQ9H7M9 311 aa16.81■□□□□ 0.28
C9orf3-216ENST00000478603 CORTO00230 105 aa16.8■□□□□ 0.28
C9orf3-216ENST00000478603 DFFBO76075 338 aa16.8■□□□□ 0.28
C9orf3-216ENST00000478603 CMC4P56277 68 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-216ENST00000478603 RTBDNQ9BSG5 229 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-216ENST00000478603 C14orf166Q9Y224 244 aaKnown RBP16.8■□□□□ 0.28
C9orf3-216ENST00000478603 OPRK1P41145 380 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 PAFAH1B2P68402 229 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 SSBP1Q04837 148 aaKnown RBP16.79■□□□□ 0.28
C9orf3-216ENST00000478603 MEF2DQ14814 521 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 GLYATL2Q8WU03 294 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 TMEM222Q9H0R3 208 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 CSTL1Q9H114 145 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 MS4A6AQ9H2W1 248 aa16.79■□□□□ 0.28
C9orf3-216ENST00000478603 BIRC6Q9NR09 4857 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 TEX13DA0A0J9YY54 714 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-216ENST00000478603 B3GALNT1O75752 331 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 CDS2O95674 445 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 RPL11P62913 178 aaKnown RBP16.78■□□□□ 0.28
C9orf3-216ENST00000478603 MRPS10P82664 201 aaKnown RBP16.78■□□□□ 0.28
C9orf3-216ENST00000478603 OR4C16Q8NGL9 310 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 SMIM4Q8WVI0 70 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 LINC00476Q8WZB0 136 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 NAA60Q9H7X0 242 aa16.78■□□□□ 0.28
C9orf3-216ENST00000478603 NUPR2A6NF83 97 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 MPTX1A8MV57 137 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 DISC1C4P0D8 188 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 DNASE2O00115 360 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-216ENST00000478603 CLN5O75503 358 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 SPCS3P61009 180 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 BSXQ3C1V8 233 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 LEMD1Q68G75 181 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 CLVS1Q8IUQ0 354 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-216ENST00000478603 SELENOHQ8IZQ5 122 aaKnown RBP16.77■□□□□ 0.28
C9orf3-216ENST00000478603 FAM24BQ8N5W8 94 aa16.77■□□□□ 0.28
C9orf3-216ENST00000478603 AGRNO00468 2067 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 CD5P06127 495 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 DEFB131AP59861 70 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 IL18Q14116 193 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 CEMP1Q6PRD7 247 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-216ENST00000478603 FAM219AQ8IW50 185 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 OR4X1Q8NH49 305 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 RBPMSQ93062 196 aaKnown RBP16.76■□□□□ 0.27
C9orf3-216ENST00000478603 GPR146Q96CH1 333 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 DIRAS2Q96HU8 199 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-216ENST00000478603 CACNG5Q9UF02 275 aa16.76■□□□□ 0.27
C9orf3-216ENST00000478603 LY6G6CO95867 125 aa16.75■□□□□ 0.27
C9orf3-216ENST00000478603 AKAIN1P0CW23 69 aa16.75■□□□□ 0.27
C9orf3-216ENST00000478603 NPPCP23582 126 aa16.75■□□□□ 0.27
C9orf3-216ENST00000478603 RPL5P46777 297 aaKnown RBP16.75■□□□□ 0.27
C9orf3-216ENST00000478603 TIGITQ495A1 244 aa16.75■□□□□ 0.27
C9orf3-216ENST00000478603 AARDQ4LEZ3 155 aa16.75■□□□□ 0.27
C9orf3-216ENST00000478603 GPR132Q9UNW8 380 aa16.75■□□□□ 0.27
C9orf3-216ENST00000478603 CRYM-AS1A6NIL9 109 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 CTDSPLO15194 276 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 NXPH3O95157 252 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 IGKV1-17P01599 117 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 ATF4P18848 351 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-216ENST00000478603 DHODHQ02127 395 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 SURF2Q15527 256 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-216ENST00000478603 TMEM268Q5VZI3 342 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 TMEM217Q8N7C4 229 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 OR51S1Q8NGJ8 323 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 OR52E5Q8NH55 327 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 DYNC2LI1Q8TCX1 351 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 TMEM230Q96A57 120 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 METTL26Q96S19 204 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 RARRES2Q99969 163 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 TMEM231Q9H6L2 316 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 HEYLQ9NQ87 328 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-216ENST00000478603 RABAC1Q9UI14 185 aa16.74■□□□□ 0.27
C9orf3-216ENST00000478603 HTR2BP41595 481 aa16.73■□□□□ 0.27
C9orf3-216ENST00000478603 GATAD1Q8WUU5 269 aa16.73■□□□□ 0.27
C9orf3-216ENST00000478603 PRR13Q9NZ81 148 aa16.73■□□□□ 0.27
C9orf3-216ENST00000478603 CCDC59Q9P031 241 aaKnown RBP16.73■□□□□ 0.27
C9orf3-216ENST00000478603 CA1P00915 261 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-216ENST00000478603 CRYBB3P26998 211 aa16.72■□□□□ 0.27
C9orf3-216ENST00000478603 STXBP6Q8NFX7 210 aa16.72■□□□□ 0.27
C9orf3-216ENST00000478603 OR11H2Q8NH07 326 aa16.72■□□□□ 0.27
C9orf3-216ENST00000478603 RAB2BQ8WUD1 216 aa16.72■□□□□ 0.27
C9orf3-216ENST00000478603 TRAV2A0A0B4J234 112 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 A0A1W2PS18 150 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 CEBPZOSA8MTT3 80 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 P2RY1P47900 373 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 PRSS54Q6PEW0 395 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 TMEM170AQ8WVE7 144 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 PRRT1Q99946 306 aa16.71■□□□□ 0.27
C9orf3-216ENST00000478603 RPS10-NUDT3A0A1W2PQS6 291 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 ANKRD20A5PA0PJZ0 165 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 SCGB2A1O75556 95 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 RND2P52198 227 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 RBMS2Q15434 407 aaKnown RBP16.7■□□□□ 0.26
C9orf3-216ENST00000478603 C2orf83Q53S99 150 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 SLC24A4Q8NFF2 622 aa16.7■□□□□ 0.26
C9orf3-216ENST00000478603 PHLDA1Q8WV24 401 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms