RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 TMEM222Q9H0R3 208 aa11.68□□□□□ -0.54
CLDN11-204ENST00000477531 TMEM231Q9H6L2 316 aa11.68□□□□□ -0.54
CLDN11-204ENST00000477531 NAA60Q9H7X0 242 aa11.68□□□□□ -0.54
CLDN11-204ENST00000477531 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
CLDN11-204ENST00000477531 IGKV3-7A0A075B6H7 116 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 CDS2O95674 445 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 TMEM50AO95807 157 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 RNASE2P10153 161 aaKnown RBP11.67□□□□□ -0.54
CLDN11-204ENST00000477531 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
CLDN11-204ENST00000477531 TFPI2P48307 235 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 RBPMSQ93062 196 aaKnown RBP11.67□□□□□ -0.54
CLDN11-204ENST00000477531 LYSTQ99698 3801 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 RTBDNQ9BSG5 229 aaPredicted RBP11.67□□□□□ -0.54
CLDN11-204ENST00000477531 SCP2D1Q9UJQ7 156 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 KCNIP3Q9Y2W7 256 aa11.67□□□□□ -0.54
CLDN11-204ENST00000477531 PUS1Q9Y606 427 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLDN11-204ENST00000477531 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 A0A1W2PS18 150 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 DNASE2O00115 360 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-204ENST00000477531 HTR2BP41595 481 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 RPL11P62913 178 aaKnown RBP11.66□□□□□ -0.54
CLDN11-204ENST00000477531 DEFB135Q30KP9 77 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 TCF24Q7RTU0 167 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 OR4C16Q8NGL9 310 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 OR52E5Q8NH55 327 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 GLYATL2Q8WU03 294 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
CLDN11-204ENST00000477531 CACFD1Q9UGQ2 172 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
CLDN11-204ENST00000477531 A0A0G2JRQ6 117 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 A6NHS1 94 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 TMEM268Q5VZI3 342 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 PVRIGQ6DKI7 326 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 WFDC3Q8IUB2 231 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
CLDN11-204ENST00000477531 GBGT1Q8N5D6 347 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 OR51S1Q8NGJ8 323 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 TMEM230Q96A57 120 aa11.65□□□□□ -0.54
CLDN11-204ENST00000477531 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
CLDN11-204ENST00000477531 DNAH1Q9P2D7 4330 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 ANKRD20A5PA0PJZ0 165 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 CLN5O75503 358 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 NPPCP23582 126 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 FAM90A2PQ658T7 463 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 Q6ZRM9 215 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 RNF183Q96D59 192 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 ZNF414Q96IQ9 312 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 METTL26Q96S19 204 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 VSIRQ9H7M9 311 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 MAP6D1Q9H9H5 199 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 MCUBQ9NWR8 336 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 CACNG5Q9UF02 275 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 RYR2Q92736 4967 aa11.64□□□□□ -0.55
CLDN11-204ENST00000477531 IGHV3-66A0A0C4DH42 116 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 A0A0J9YWU9 116 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 CXorf65A6NEN9 183 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 FABP12A6NFH5 140 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 GSTZ1O43708 216 aaPredicted RBP11.63□□□□□ -0.55
CLDN11-204ENST00000477531 TNFRSF9Q07011 255 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 AARDQ4LEZ3 155 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 LYG2Q86SG7 212 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 MCFD2Q8NI22 146 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 LHFPL5Q8TAF8 219 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 SLIRPQ9GZT3 109 aaKnown RBP11.63□□□□□ -0.55
CLDN11-204ENST00000477531 CSTL1Q9H114 145 aa11.63□□□□□ -0.55
CLDN11-204ENST00000477531 MPTX1A8MV57 137 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 DFFBO76075 338 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 SULT1A3P0DMM9 295 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 SULT1A4P0DMN0 295 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 ANXA3P12429 323 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 BSXQ3C1V8 233 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 RNASEH2CQ8TDP1 164 aaKnown RBP11.62□□□□□ -0.55
CLDN11-204ENST00000477531 IL22RA2Q969J5 263 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
CLDN11-204ENST00000477531 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 TMEM56-RWDD3S4R434 201 aa11.62□□□□□ -0.55
CLDN11-204ENST00000477531 TRAV2A0A0B4J234 112 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 PIGBOS1A0A0B4J2F0 54 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 A0A1B0GU03 582 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 APOHP02749 345 aaPredicted RBP11.61□□□□□ -0.55
CLDN11-204ENST00000477531 SLC25A4P12235 298 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 TNFSF8P32971 234 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
CLDN11-204ENST00000477531 PMS2P11Q13670 270 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 MLANAQ16655 118 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 C2orf83Q53S99 150 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
CLDN11-204ENST00000477531 SLC24A4Q8NFF2 622 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms