RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 TOMM5Q8N4H5 51 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 IL22RA2Q969J5 263 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 GALNT14Q96FL9 552 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 GINS3Q9BRX5 216 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 CACNG5Q9UF02 275 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 CACFD1Q9UGQ2 172 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 TMEM56-RWDD3S4R434 201 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 V9GYH0 126 aa8.53□□□□□ -1.04
NUDCD3-206ENST00000475952 PIGBOS1A0A0B4J2F0 54 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 IGHV7-4-1A0A0J9YVY3 117 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 OR4C46A6NHA9 309 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 ZNF701M0R085 212 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 BMI1P35226 326 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 HTR2BP41595 481 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 SRPXP78539 464 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 PVRIGQ6DKI7 326 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 Q6ZRM9 215 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 DEDD2Q8WXF8 326 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 TRIM63Q969Q1 353 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 OR10C1Q96KK4 312 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 RBM38Q9H0Z9 239 aaKnown RBP8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 HECTD4Q9Y4D8 3996 aa8.52□□□□□ -1.05
NUDCD3-206ENST00000475952 LOC102724200A0A096LPH7 203 aaPredicted RBP8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 RPS10-NUDT3A0A1W2PQS6 291 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 RBMY1BA6NDE4 496 aaKnown RBP8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 RBMY1EA6NEQ0 496 aaKnown RBP8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 RBMY1DP0C7P1 496 aaKnown RBP8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 SULT1A3P0DMM9 295 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 SULT1A4P0DMN0 295 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 AKR1C4P17516 323 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 KLF9Q13886 244 aaPredicted RBP8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 TMEM187Q14656 261 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 BSXQ3C1V8 233 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 SPANXN2Q5MJ10 180 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 ZNF600Q6ZNG1 722 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 TMEM116Q8NCL8 245 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 SLC24A4Q8NFF2 622 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 GPR146Q96CH1 333 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 RHPN1-AS1Q9BWJ2 59 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 GGTLC1Q9BX51 225 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 HIPK2Q9H2X6 1198 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 SMPXQ9UHP9 88 aa8.51□□□□□ -1.05
NUDCD3-206ENST00000475952 TRAV14DV4A0A0A6YYC5 116 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 A0A0B4J2A0 478 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 CEBPZOSA8MTT3 80 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 CHEK1O14757 476 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 ZNF79Q15937 498 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 ZFAND6Q6FIF0 208 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 TOMM20LQ6UXN7 152 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 TMED4Q7Z7H5 227 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 CCDC190Q86UF4 302 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 LGI3Q8N145 548 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 RNF2Q99496 336 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 FAM110AQ9BQ89 295 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 RETNQ9HD89 108 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 PRR13Q9NZ81 148 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 UBQLN2Q9UHD9 624 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 SHPKQ9UHJ6 478 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 PUS1Q9Y606 427 aaKnown RBP eCLIP8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 AGRNO00468 2067 aa8.5□□□□□ -1.05
NUDCD3-206ENST00000475952 TRAV30A0A087WSZ9 112 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 IGHV3-49A0A0A0MS15 119 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 CLN5O75503 358 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 NXPH3O95157 252 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 TMEM50AO95807 157 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 CD5P06127 495 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 CCR6P51684 374 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 SUPT4H1P63272 117 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 SMCO1Q147U7 214 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 C2orf83Q53S99 150 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 NOXA1Q86UR1 476 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 OR4X1Q8NH49 305 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 RNASEH2CQ8TDP1 164 aaKnown RBP8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 ZNF414Q96IQ9 312 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 SLC25A21Q9BQT8 299 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 TMEM231Q9H6L2 316 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 ZFAND3Q9H8U3 227 aa8.49□□□□□ -1.05
NUDCD3-206ENST00000475952 DUXBA0A1W2PPF3 345 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 NPY1RP25929 384 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 INPP1P49441 399 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 APOC4P55056 127 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 PAFAH1B2P68402 229 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 ODF3L2Q3SX64 289 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 TMEM128Q5BJH2 165 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 NMSQ5H8A3 153 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 ETFRF1Q6IPR1 90 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 METTL26Q96S19 204 aa8.48□□□□□ -1.05
NUDCD3-206ENST00000475952 IGKV3-7A0A075B6H7 116 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 IGHV3OR16-13A0A075B7E8 117 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 IGHV3-74A0A0B4J1X5 117 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 A0A1W2PS18 150 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 SLC25A4P12235 298 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 VAMP1P23763 118 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 TNFRSF9Q07011 255 aa8.47□□□□□ -1.05
NUDCD3-206ENST00000475952 RBMS2Q15434 407 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms