RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TNRC6BQ9UPQ9 1833 aaKnown RBP0.83□□□□□ -2.28
LTN1-204ENST00000475344 IGKV1D-42A0A075B6H8 117 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 A0A087WUJ7 227 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 EXOC1LA0A1B0GW35 172 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 DPRXA6NFQ7 191 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 BUB1B-PAK6H3BSN5 160 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 KPNA3O00505 521 aaPredicted RBP0.83□□□□□ -2.28
LTN1-204ENST00000475344 CNIH1O95406 144 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 TTRP02766 147 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 TCRBP04435 133 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 RANP62826 216 aaKnown RBP0.83□□□□□ -2.28
LTN1-204ENST00000475344 AESQ08117 197 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 Q6ZQT0 140 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 MIR17HGQ75NE6 70 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 PHF13Q86YI8 300 aaPredicted RBP0.83□□□□□ -2.28
LTN1-204ENST00000475344 OR52R1Q8NGF1 315 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 TERB2Q8NHR7 220 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 AQP3Q92482 292 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 DCUN1D1Q96GG9 259 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 ODF3Q96PU9 254 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 TSPAN32Q96QS1 320 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 C20orf27Q9GZN8 174 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 TMEM56-RWDD3S4R434 201 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 PLB1Q6P1J6 1458 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 MYO3BQ8WXR4 1341 aa0.83□□□□□ -2.28
LTN1-204ENST00000475344 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 COL4A5P29400 1685 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 DENND4CQ5VZ89 1909 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 TRAV9-1A0A075B6T8 112 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 TRAV26-2A0A0B4J265 109 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 PQLC2LA1A4F0 135 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 C19orf84I3L1E1 186 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 GEMIN2O14893 280 aaKnown RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 RPP14O95059 124 aaKnown RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 CRYZL1O95825 349 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 TCL1BO95988 128 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 CTSDP07339 412 aaPredicted RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 PRB4P10163 310 aaPredicted RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 FKBP2P26885 142 aaKnown RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 OMPP47874 163 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 SPOPLQ6IQ16 392 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 DPPA3Q6W0C5 159 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 DNAJC9Q8WXX5 260 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 TMEM147Q9BVK8 224 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.82□□□□□ -2.28
LTN1-204ENST00000475344 ROBO3Q96MS0 1386 aa0.82□□□□□ -2.28
LTN1-204ENST00000475344 A0A087WX48 190 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 SMIM9A6NGZ8 99 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 MIFP14174 115 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 SPI1P17947 270 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 CDKN2CP42773 168 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 CEBPGP53567 150 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 OR4E2Q8NGC2 313 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 PPP1R14BQ96C90 147 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 GINS4Q9BRT9 223 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 RNASE7Q9H1E1 156 aaKnown RBP0.81□□□□□ -2.28
LTN1-204ENST00000475344 DCSTAMPQ9H295 470 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 C14orf105Q9NVL8 296 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 PRELID3BQ9Y3B1 194 aa0.81□□□□□ -2.28
LTN1-204ENST00000475344 OBSL1O75147 1896 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 EML5Q05BV3 1969 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 OR2B3O76000 313 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 OR2J2O76002 312 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 BAALC-AS2P0C853 105 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 SMIM10L2AP0DMW4 78 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 SMIM10L2BP0DMW5 78 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 CDC42P60953 191 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 CTAG1AP78358 180 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 RGS21Q2M5E4 152 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 C12orf45Q8N5I9 185 aaPredicted RBP0.8□□□□□ -2.28
LTN1-204ENST00000475344 OR5A1Q8NGJ0 315 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 OR51V1Q9H2C8 321 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 SLC39A9Q9NUM3 307 aa0.8□□□□□ -2.28
LTN1-204ENST00000475344 CHD3Q12873 2000 aaKnown RBP0.8□□□□□ -2.28
LTN1-204ENST00000475344 CASP8AP2Q9UKL3 1982 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 LOC110117498A0A087WWA1 95 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 hADV38S2A0JD32 116 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 PIRO00625 290 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 FADS1O60427 444 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 ASAH2BP0C7U1 165 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 BRS3P32247 399 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 DEFA3P59666 94 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 PDE6HQ13956 83 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 RHEBQ15382 184 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 KHDC3LQ587J8 217 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 FAM19A2Q8N3H0 131 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 SIGLECL1Q8N7X8 197 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 MNS1Q8NEH6 495 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 LINC00526Q96FQ7 95 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 SLC50A1Q9BRV3 221 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 UQCC1Q9NVA1 299 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 NHP2Q9NX24 153 aaKnown RBP0.79□□□□□ -2.28
LTN1-204ENST00000475344 CYSLTR1Q9Y271 337 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 ERGIC3Q9Y282 383 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 NEO1Q92859 1461 aa0.79□□□□□ -2.28
LTN1-204ENST00000475344 SBF1O95248 1867 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 TRAV1-1A0A0B4J248 108 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 OR2T1O43869 369 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 OR1I1O60431 355 aa0.78□□□□□ -2.28
LTN1-204ENST00000475344 HYPMO75409 117 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms