RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CHRDL1Q9BU40 450 aa12.9□□□□□ -0.34
SCAF11-206ENST00000474828 C7orf66A4D0T2 115 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 NXPH3O95157 252 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 IGLV1-51P01701 117 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 SPNP16150 400 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 NKX2-1P43699 371 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-206ENST00000474828 ELLP55199 621 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-206ENST00000474828 KRTAP10-11P60412 298 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 IAH1Q2TAA2 248 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-206ENST00000474828 ADAMTSL5Q6ZMM2 481 aa12.89□□□□□ -0.35
SCAF11-206ENST00000474828 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-206ENST00000474828 MRPL36Q9P0J6 103 aaKnown RBP12.89□□□□□ -0.35
SCAF11-206ENST00000474828 ZMAT5Q9UDW3 170 aaKnown RBP12.89□□□□□ -0.35
SCAF11-206ENST00000474828 IGHV3-21A0A0B4J1V1 117 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 OR2T8A6NH00 312 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 PRSS46E5RG02 174 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 C8orf88P0DMB2 117 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 SLC25A4P12235 298 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 NPBWR1P48145 328 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 PAX9P55771 341 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 FAM106AQ4KMX7 169 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 ELOVL1Q9BW60 279 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 PEMTQ9UBM1 199 aa12.88□□□□□ -0.35
SCAF11-206ENST00000474828 RPS10-NUDT3A0A1W2PQS6 291 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 NDUFA4O00483 81 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 CLN5O75503 358 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 TMEM50AO95807 157 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 IFNA10P01566 189 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 GPX4P36969 197 aaPredicted RBP12.87□□□□□ -0.35
SCAF11-206ENST00000474828 TAS2R30P59541 319 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 CD69Q07108 199 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 MLANAQ16655 118 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 PRSS54Q6PEW0 395 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 TMEM190Q8WZ59 177 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 PINX1Q96BK5 328 aaKnown RBP12.87□□□□□ -0.35
SCAF11-206ENST00000474828 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 C11orf1Q9H5F2 150 aa12.87□□□□□ -0.35
SCAF11-206ENST00000474828 TMEM213A2RRL7 107 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 K7EMT4 169 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 MBPP02686 304 aaPredicted RBP12.86□□□□□ -0.35
SCAF11-206ENST00000474828 OPRK1P41145 380 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 POLR2GP62487 172 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCAF11-206ENST00000474828 DCTN2Q13561 401 aaKnown RBP12.86□□□□□ -0.35
SCAF11-206ENST00000474828 ETFRF1Q6IPR1 90 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 UNQ9165/PRO28630Q6UXU0 137 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 C2orf50Q96LR7 162 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 MAGT1Q9H0U3 335 aa12.86□□□□□ -0.35
SCAF11-206ENST00000474828 RCL1Q9Y2P8 373 aaKnown RBP12.86□□□□□ -0.35
SCAF11-206ENST00000474828 PRKDCP78527 4128 aaKnown RBP12.86□□□□□ -0.35
SCAF11-206ENST00000474828 C2orf70A6NJV1 201 aa12.85□□□□□ -0.35
SCAF11-206ENST00000474828 CCSO14618 274 aa12.85□□□□□ -0.35
SCAF11-206ENST00000474828 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
SCAF11-206ENST00000474828 IGKV1-17P01599 117 aa12.85□□□□□ -0.35
SCAF11-206ENST00000474828 IGHV3-48P01763 117 aa12.85□□□□□ -0.35
SCAF11-206ENST00000474828 RELQ04864 619 aaPredicted RBP12.85□□□□□ -0.35
SCAF11-206ENST00000474828 Q56UQ5 140 aa12.85□□□□□ -0.35
SCAF11-206ENST00000474828 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
SCAF11-206ENST00000474828 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 PMS2P5A8MQ11 134 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 WRBO00258 174 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 GNG7O60262 68 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 SAP30O75446 220 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 IGLC1P0CG04 106 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 IAPPP10997 89 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 CBLN1P23435 193 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
SCAF11-206ENST00000474828 TMEM14EPQ6UXP3 125 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 OR2K2Q8NGT1 345 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 UFC1Q9Y3C8 167 aa12.84□□□□□ -0.35
SCAF11-206ENST00000474828 TSC22D2O75157 780 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 FOLR2P14207 255 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 RAB11AP62491 216 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 GSG1LQ6UXU4 331 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 UBAC2Q8NBM4 344 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 UXS1Q8NBZ7 420 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
SCAF11-206ENST00000474828 AURKAIP1Q9NWT8 199 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-206ENST00000474828 MRPL27Q9P0M9 148 aaKnown RBP12.83□□□□□ -0.36
SCAF11-206ENST00000474828 YPEL3P61236 119 aaPredicted RBP12.82□□□□□ -0.36
SCAF11-206ENST00000474828 GAMTQ14353 236 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 OXA1LQ15070 435 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 DEFB114Q30KQ6 69 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 ZNF600Q6ZNG1 722 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 ZFAND3Q9H8U3 227 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 DAZ1Q9NQZ3 744 aaKnown RBP12.82□□□□□ -0.36
SCAF11-206ENST00000474828 TECRQ9NZ01 308 aaKnown RBP12.82□□□□□ -0.36
SCAF11-206ENST00000474828 GSKIPQ9P0R6 139 aa12.82□□□□□ -0.36
SCAF11-206ENST00000474828 STRAPQ9Y3F4 350 aaKnown RBP12.82□□□□□ -0.36
SCAF11-206ENST00000474828 C5orf51A6NDU8 294 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 K7EPK0 472 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 SSSCA1O60232 199 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 IFNA4P05014 189 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 RND2P52198 227 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 TM4SF20Q53R12 229 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 OR1S2Q8NGQ3 325 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms