RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ALDH3B2P48448 385 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 OR52E5Q8NH55 327 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 SMIM4Q8WVI0 70 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 TMEM222Q9H0R3 208 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 VSIRQ9H7M9 311 aa15.04■□□□□ -0
PDLIM4-206ENST00000474421 IGKV3-7A0A075B6H7 116 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 IGHV3OR16-13A0A075B7E8 117 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 IGHV3-74A0A0B4J1X5 117 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 TEX13DA0A0J9YY54 714 aaPredicted RBP15.03■□□□□ -0
PDLIM4-206ENST00000474421 OPRK1P41145 380 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 SPCS3P61009 180 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 DHODHQ02127 395 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 GBGT1Q8N5D6 347 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 OR4X1Q8NH49 305 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 ST8SIA2Q92186 375 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 CSTL1Q9H114 145 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 NAA60Q9H7X0 242 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 ZFAND3Q9H8U3 227 aa15.03■□□□□ -0
PDLIM4-206ENST00000474421 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.03■□□□□ -0
PDLIM4-206ENST00000474421 TRAV2A0A0B4J234 112 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 A0A1W2PS18 150 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 MPTX1A8MV57 137 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 DNASE2O00115 360 aaPredicted RBP15.02■□□□□ -0
PDLIM4-206ENST00000474421 CTDSP2O14595 271 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 CTDSPLO15194 276 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 CLN5O75503 358 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 DFFBO76075 338 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 OR5AC1P0C628 307 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 AKAIN1P0CW23 69 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 AARDQ4LEZ3 155 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 RAB2BQ8WUD1 216 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 RBPMSQ93062 196 aaKnown RBP15.02■□□□□ -0
PDLIM4-206ENST00000474421 PRRT1Q99946 306 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 CACFD1Q9UGQ2 172 aa15.02■□□□□ -0
PDLIM4-206ENST00000474421 A0A0G2JRQ6 117 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 RPS10-NUDT3A0A1W2PQS6 291 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 NPPCP23582 126 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 HTR2BP41595 481 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 RPL11P62913 178 aaKnown RBP15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 PMS2P11Q13670 270 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 SPCS2Q15005 226 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 BSXQ3C1V8 233 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 GLYATL2Q8WU03 294 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 GATAD1Q8WUU5 269 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 DIRAS2Q96HU8 199 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 METTL26Q96S19 204 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 BCL7BQ9BQE9 202 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 RTBDNQ9BSG5 229 aaPredicted RBP15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 MS4A6AQ9H2W1 248 aa15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 CCDC59Q9P031 241 aaKnown RBP15.01□□□□□ -0.01
PDLIM4-206ENST00000474421 TRAV30A0A087WSZ9 112 aa15□□□□□ -0.01
PDLIM4-206ENST00000474421 A0A1B0GU03 582 aa15□□□□□ -0.01
PDLIM4-206ENST00000474421 IL18Q14116 193 aa15□□□□□ -0.01
PDLIM4-206ENST00000474421 FAAP20Q6NZ36 180 aa15□□□□□ -0.01
PDLIM4-206ENST00000474421 Q6ZRM9 215 aa15□□□□□ -0.01
PDLIM4-206ENST00000474421 CLVS1Q8IUQ0 354 aaPredicted RBP15□□□□□ -0.01
PDLIM4-206ENST00000474421 NARS2Q96I59 477 aaKnown RBP15□□□□□ -0.01
PDLIM4-206ENST00000474421 FNDC4Q9H6D8 234 aaPredicted RBP15□□□□□ -0.01
PDLIM4-206ENST00000474421 APOHP02749 345 aaPredicted RBP14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 ZNF124Q15973 351 aa14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 CEMP1Q6PRD7 247 aaPredicted RBP14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 SELENOHQ8IZQ5 122 aaKnown RBP14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 OR4C16Q8NGL9 310 aa14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 TMEM230Q96A57 120 aa14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 HEYLQ9NQ87 328 aaPredicted RBP14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 GPR132Q9UNW8 380 aa14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 KLK5Q9Y337 293 aaPredicted RBP14.99□□□□□ -0.01
PDLIM4-206ENST00000474421 CRYM-AS1A6NIL9 109 aa14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 TMBIM6P55061 237 aa14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 LILRB2Q8N423 598 aa14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 LHFPL5Q8TAF8 219 aa14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 SCGB3A2Q96PL1 93 aa14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 CACNG5Q9UF02 275 aa14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 EPPK1P58107 5090 aaKnown RBP14.98□□□□□ -0.01
PDLIM4-206ENST00000474421 IGHV3-66A0A0C4DH42 116 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 SLC25A4P12235 298 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 CRYBB3P26998 211 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 EWSR1Q01844 656 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 C2orf83Q53S99 150 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 TMEM268Q5VZI3 342 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 NOXA1Q86UR1 476 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 DYNC2LI1Q8TCX1 351 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 RNASEH2CQ8TDP1 164 aaKnown RBP14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 LINC00476Q8WZB0 136 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 GRAMD2BQ96HH9 432 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 RARRES2Q99969 163 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 MRPL36Q9P0J6 103 aaKnown RBP14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 RSL24D1Q9UHA3 163 aaKnown RBP14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 SCP2D1Q9UJQ7 156 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 KCNIP3Q9Y2W7 256 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 TMEM56-RWDD3S4R434 201 aa14.97□□□□□ -0.01
PDLIM4-206ENST00000474421 CEBPZOSA8MTT3 80 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 GSTZ1O43708 216 aaPredicted RBP14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 NOL3O60936 208 aaKnown RBP14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 IGKV1-17P01599 117 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 DEFB131AP59861 70 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 MLANAQ16655 118 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 OR51S1Q8NGJ8 323 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 OR1S2Q8NGQ3 325 aa14.96□□□□□ -0.01
PDLIM4-206ENST00000474421 IL22RA2Q969J5 263 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms