RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.36□□□□□ -1.07
SEMA4D-216ENST00000474258 TECRQ9NZ01 308 aaKnown RBP8.36□□□□□ -1.07
SEMA4D-216ENST00000474258 MARCH11A6NNE9 402 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 FAM90A26D6RGX4 464 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 K7EPK0 472 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 ST8SIA3O43173 380 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 NDUFB8O95169 186 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 IGHV3-23P01764 117 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 RLN2P04090 185 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 CD7P09564 240 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 HIST1H1BP16401 226 aaKnown RBP8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 CTRB1P17538 263 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 ARL3P36405 182 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 NKX2-1P43699 371 aaPredicted RBP8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 AKR1C2P52895 323 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 NKX2-5P52952 324 aaPredicted RBP8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 RPL8P62917 257 aaKnown RBP8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 GUCA2BQ16661 112 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 KLK9Q2XQG4 91 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 LGALSLQ3ZCW2 172 aaPredicted RBP8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 FAM106AQ4KMX7 169 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 CLEC19AQ6UXS0 136 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 SSX9Q7RTT3 188 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 H2BFWTQ7Z2G1 175 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 C9orf62Q8N4C0 152 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 EEF1AKMT3Q96AZ1 226 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 FANCD2OSQ96PS1 177 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 C11orf1Q9H5F2 150 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 BET1LQ9NYM9 111 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 CACNG5Q9UF02 275 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 CACFD1Q9UGQ2 172 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 KLK9Q9UKQ9 250 aa8.35□□□□□ -1.07
SEMA4D-216ENST00000474258 A0A1B0GW64 132 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 OR11H12B2RN74 326 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 DEDDO75618 318 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 PET100P0DJ07 73 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 DEFA4P12838 97 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 AREGP15514 252 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 CBLN1P23435 193 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 ERVK-16P61578 105 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 LRRC37A5PQ49AS3 106 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 C19orf35Q6ZS72 473 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 ZNF546Q86UE3 836 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 DEFB125Q8N687 156 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 DMBX1Q8NFW5 382 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 OR52E5Q8NH55 327 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 OR1S1Q8NH92 325 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 RNASE11Q8TAA1 199 aaKnown RBP8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 CCDC140Q96MF4 163 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 HIPK2Q9H2X6 1198 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 ZC4H2Q9NQZ6 224 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 GAR1Q9NY12 217 aaKnown RBP8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 OR5AC2Q9NZP5 309 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 MBD2Q9UBB5 411 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 TNFSF18Q9UNG2 199 aa8.34□□□□□ -1.07
SEMA4D-216ENST00000474258 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 FXYD6-FXYD2A0A087WZ82 144 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 TRBV7-1A0A0A6YYK4 115 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 ZNF320A2RRD8 509 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 RBMY1BA6NDE4 496 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 RBMY1EA6NEQ0 496 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 E5RGE8 158 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 UPK2O00526 184 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 FGF2P09038 288 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 RBMY1DP0C7P1 496 aaKnown RBP8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 CXCL2P19875 107 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 EDN2P20800 178 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 OR4A47Q6IF82 309 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 ACOT7LQ6ZUV0 252 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 CXorf58Q96LI9 332 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 SRD5A3Q9H8P0 318 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 RETNQ9HD89 108 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 TMEM140Q9NV12 185 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 NSG2Q9Y328 171 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 S4R3C0 116 aa8.33□□□□□ -1.08
SEMA4D-216ENST00000474258 IGLV11-55A0A075B6I3 123 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 A0A0D9SG52 128 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 CGB1A6NKQ9 187 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 ARPC5O15511 151 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 REG1AP05451 166 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 CLEC3BP05452 202 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 MYOD1P15172 320 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 P2RY1P47900 373 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 PAX9P55771 341 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 TAS2R30P59541 319 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 S100A10P60903 97 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 POLR2GP62487 172 aaKnown RBP eCLIP8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 OR2F1Q13607 317 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 ZNF345Q14585 488 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 KCNRGQ8N5I3 272 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 AQP10Q96PS8 301 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 RAB40CQ96S21 281 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 COMMD5Q9GZQ3 224 aa8.32□□□□□ -1.08
SEMA4D-216ENST00000474258 MFFQ9GZY8 342 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms