RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZNF436Q9C0F3 470 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-211ENST00000472490 A8MWP6 167 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 ADAP1O75689 374 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 CTSGP08311 255 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 SLC25A4P12235 298 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 ELLP55199 621 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-211ENST00000472490 RAB11AP62491 216 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 LCN12Q6JVE5 192 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 IL34Q6ZMJ4 242 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 OR52B4Q8NGK2 314 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 OR2K2Q8NGT1 345 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 DYNLRB2Q8TF09 96 aa10.82□□□□□ -0.68
BRCA1-211ENST00000472490 GPN1Q9HCN4 374 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-211ENST00000472490 TECRQ9NZ01 308 aaKnown RBP10.82□□□□□ -0.68
BRCA1-211ENST00000472490 TRAV30A0A087WSZ9 112 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 C2orf70A6NJV1 201 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 F8W735 103 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-211ENST00000472490 WRBO00258 174 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 SYNGR2O43760 224 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 IGHV3-48P01763 117 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 IFNA4P05014 189 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 FOLR2P14207 255 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 CBLN1P23435 193 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 NKX2-1P43699 371 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-211ENST00000472490 IFITM3Q01628 133 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 OR4X1Q8NH49 305 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 CHRDL1Q9BU40 450 aa10.81□□□□□ -0.68
BRCA1-211ENST00000472490 DAZ1Q9NQZ3 744 aaKnown RBP10.81□□□□□ -0.68
BRCA1-211ENST00000472490 NBEAL1Q6ZS30 2694 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 IGHV3-35A0A0C4DH35 117 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 K7EMT4 169 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 PRAF2O60831 178 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 YIF1AO95070 293 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 IL5P05113 134 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 SPNP16150 400 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 ADMP35318 185 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 ID3Q02535 119 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 IAH1Q2TAA2 248 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-211ENST00000472490 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 NRARPQ7Z6K4 114 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 C12orf45Q8N5I9 185 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-211ENST00000472490 UXS1Q8NBZ7 420 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 TMEM190Q8WZ59 177 aa10.8□□□□□ -0.68
BRCA1-211ENST00000472490 FNDC4Q9H6D8 234 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-211ENST00000472490 MRPL27Q9P0M9 148 aaKnown RBP10.8□□□□□ -0.68
BRCA1-211ENST00000472490 TMEM213A2RRL7 107 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 MPTX1A8MV57 137 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 CLN5O75503 358 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 TMEM50AO95807 157 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 GP9P14770 177 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 PRR20EP86478 221 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 PRR20CP86479 221 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 PRR20DP86480 221 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 PRR20BP86481 221 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 PRR20AP86496 221 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 DEFB121Q5J5C9 76 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 TMEM116Q8NCL8 245 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 OR4D5Q8NGN0 318 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 SEC22CQ9BRL7 303 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 GINS3Q9BRX5 216 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 C20orf24Q9BUV8 137 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 MAGT1Q9H0U3 335 aa10.79□□□□□ -0.68
BRCA1-211ENST00000472490 WI2-2373I1.2A0A1W2PRP0 233 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 C5orf51A6NDU8 294 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 INMT-MINDY4F8WBC2 141 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 K7EIL1 84 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 IAPPP10997 89 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 BMI1P35226 326 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 GPX4P36969 197 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-211ENST00000472490 CD69Q07108 199 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 TM4SF20Q53R12 229 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 ZNF600Q6ZNG1 722 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 CACNG8Q8WXS5 425 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 PRR25Q96S07 402 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 GSKIPQ9P0R6 139 aa10.78□□□□□ -0.68
BRCA1-211ENST00000472490 PAIP2BQ9ULR5 123 aaKnown RBP10.78□□□□□ -0.68
BRCA1-211ENST00000472490 SNRPGP15A8MWD9 76 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 FAM25EA8MYX2 175 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 C8orf88P0DMB2 117 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 RND2P52198 227 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 MLANAQ16655 118 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 CD300EQ496F6 205 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-211ENST00000472490 SPANXN5Q5MJ07 72 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 PRSS54Q6PEW0 395 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 SLC16A13Q7RTY0 426 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 GTSCR1Q86UQ5 136 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 HAPLN4Q86UW8 402 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 ZBTB8BQ8NAP8 495 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-211ENST00000472490 OR1S2Q8NGQ3 325 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 TMEM170AQ8WVE7 144 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 OR10C1Q96KK4 312 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 RAB40CQ96S21 281 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 MARVELD1Q9BSK0 173 aa10.77□□□□□ -0.69
BRCA1-211ENST00000472490 STRAPQ9Y3F4 350 aaKnown RBP10.77□□□□□ -0.69
BRCA1-211ENST00000472490 TRAV14DV4A0A0A6YYC5 116 aa10.76□□□□□ -0.69
BRCA1-211ENST00000472490 SCGB1D2O95969 90 aa10.76□□□□□ -0.69
BRCA1-211ENST00000472490 POLR2GP62487 172 aaKnown RBP eCLIP10.76□□□□□ -0.69
BRCA1-211ENST00000472490 GSG1LQ6UXU4 331 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms