RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ATF4P18848 351 aaPredicted RBP16.6■□□□□ 0.25
C9orf3-213ENST00000471978 LILRB2Q8N423 598 aa16.6■□□□□ 0.25
C9orf3-213ENST00000471978 TMEM217Q8N7C4 229 aa16.6■□□□□ 0.25
C9orf3-213ENST00000471978 LINC00476Q8WZB0 136 aa16.6■□□□□ 0.25
C9orf3-213ENST00000471978 A0A1B0GU03 582 aa16.59■□□□□ 0.25
C9orf3-213ENST00000471978 DFFBO76075 338 aa16.59■□□□□ 0.25
C9orf3-213ENST00000471978 SSBP1Q04837 148 aaKnown RBP16.59■□□□□ 0.25
C9orf3-213ENST00000471978 FAAP20Q6NZ36 180 aa16.59■□□□□ 0.25
C9orf3-213ENST00000471978 CEMP1Q6PRD7 247 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-213ENST00000471978 GPR141Q7Z602 305 aa16.59■□□□□ 0.25
C9orf3-213ENST00000471978 TMEM222Q9H0R3 208 aa16.59■□□□□ 0.25
C9orf3-213ENST00000471978 MS4A6AQ9H2W1 248 aa16.59■□□□□ 0.25
C9orf3-213ENST00000471978 C14orf166Q9Y224 244 aaKnown RBP16.59■□□□□ 0.25
C9orf3-213ENST00000471978 DNASE2O00115 360 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 CTDSP2O14595 271 aa16.58■□□□□ 0.24
C9orf3-213ENST00000471978 CDS2O95674 445 aa16.58■□□□□ 0.24
C9orf3-213ENST00000471978 OR5AC1P0C628 307 aa16.58■□□□□ 0.24
C9orf3-213ENST00000471978 OPRK1P41145 380 aa16.58■□□□□ 0.24
C9orf3-213ENST00000471978 RPL11P62913 178 aaKnown RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 MRPS10P82664 201 aaKnown RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 MEF2DQ14814 521 aa16.58■□□□□ 0.24
C9orf3-213ENST00000471978 Q6ZRM9 215 aa16.58■□□□□ 0.24
C9orf3-213ENST00000471978 RTBDNQ9BSG5 229 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 MRPS26Q9BYN8 205 aaKnown RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 FNDC4Q9H6D8 234 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 MRPL36Q9P0J6 103 aaKnown RBP16.58■□□□□ 0.24
C9orf3-213ENST00000471978 TEX13DA0A0J9YY54 714 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-213ENST00000471978 CLN5O75503 358 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 LY6G6CO95867 125 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 SPCS3P61009 180 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 SPCS2Q15005 226 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 MLANAQ16655 118 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 FAM219AQ8IW50 185 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 OR4X1Q8NH49 305 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 GATAD1Q8WUU5 269 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 TMEM231Q9H6L2 316 aa16.57■□□□□ 0.24
C9orf3-213ENST00000471978 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.57■□□□□ 0.24
C9orf3-213ENST00000471978 DISC1C4P0D8 188 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 NPPCP23582 126 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 RPL5P46777 297 aaKnown RBP16.56■□□□□ 0.24
C9orf3-213ENST00000471978 ALDH3B2P48448 385 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 BSXQ3C1V8 233 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 LHFPL5Q8TAF8 219 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 GLYATL2Q8WU03 294 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 SMIM4Q8WVI0 70 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 RARRES2Q99969 163 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 NAA60Q9H7X0 242 aa16.56■□□□□ 0.24
C9orf3-213ENST00000471978 TRAV2A0A0B4J234 112 aa16.55■□□□□ 0.24
C9orf3-213ENST00000471978 SCGB2A1O75556 95 aa16.55■□□□□ 0.24
C9orf3-213ENST00000471978 DEFB131AP59861 70 aa16.55■□□□□ 0.24
C9orf3-213ENST00000471978 SURF2Q15527 256 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-213ENST00000471978 AARDQ4LEZ3 155 aa16.55■□□□□ 0.24
C9orf3-213ENST00000471978 OR52E5Q8NH55 327 aa16.55■□□□□ 0.24
C9orf3-213ENST00000471978 RBPMSQ93062 196 aaKnown RBP16.55■□□□□ 0.24
C9orf3-213ENST00000471978 KLK5Q9Y337 293 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-213ENST00000471978 A0A1W2PS18 150 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 AKAIN1P0CW23 69 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 HTR2BP41595 481 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 DHODHQ02127 395 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 IL18Q14116 193 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 LEMD1Q68G75 181 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 SELENOHQ8IZQ5 122 aaKnown RBP16.54■□□□□ 0.24
C9orf3-213ENST00000471978 TMEM230Q96A57 120 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 METTL26Q96S19 204 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 HEYLQ9NQ87 328 aaPredicted RBP16.54■□□□□ 0.24
C9orf3-213ENST00000471978 RABAC1Q9UI14 185 aa16.54■□□□□ 0.24
C9orf3-213ENST00000471978 FAM24BQ8N5W8 94 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 OR4C16Q8NGL9 310 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 OR11H2Q8NH07 326 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 GPR146Q96CH1 333 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 DIRAS2Q96HU8 199 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 CACNG5Q9UF02 275 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 GPR132Q9UNW8 380 aa16.53■□□□□ 0.24
C9orf3-213ENST00000471978 TRAV30A0A087WSZ9 112 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 RPS10-NUDT3A0A1W2PQS6 291 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 CTDSPLO15194 276 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 CA1P00915 261 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-213ENST00000471978 IGKV1-17P01599 117 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 CRYBB3P26998 211 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 TIGITQ495A1 244 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 TMEM268Q5VZI3 342 aa16.52■□□□□ 0.24
C9orf3-213ENST00000471978 CLVS1Q8IUQ0 354 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-213ENST00000471978 CRYM-AS1A6NIL9 109 aa16.51■□□□□ 0.23
C9orf3-213ENST00000471978 STXBP6Q8NFX7 210 aa16.51■□□□□ 0.23
C9orf3-213ENST00000471978 PHLDA1Q8WV24 401 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-213ENST00000471978 NARS2Q96I59 477 aaKnown RBP16.51■□□□□ 0.23
C9orf3-213ENST00000471978 PRRT1Q99946 306 aa16.51■□□□□ 0.23
C9orf3-213ENST00000471978 RABL2AQ9UBK7 228 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-213ENST00000471978 RABL2BQ9UNT1 228 aa16.51■□□□□ 0.23
C9orf3-213ENST00000471978 CEBPZOSA8MTT3 80 aa16.5■□□□□ 0.23
C9orf3-213ENST00000471978 P2RY1P47900 373 aa16.5■□□□□ 0.23
C9orf3-213ENST00000471978 C2orf83Q53S99 150 aa16.5■□□□□ 0.23
C9orf3-213ENST00000471978 STHQ8IWL8 128 aa16.5■□□□□ 0.23
C9orf3-213ENST00000471978 OR51S1Q8NGJ8 323 aa16.5■□□□□ 0.23
C9orf3-213ENST00000471978 RAB2BQ8WUD1 216 aa16.5■□□□□ 0.23
C9orf3-213ENST00000471978 TMEM187Q14656 261 aa16.49■□□□□ 0.23
C9orf3-213ENST00000471978 PRSS54Q6PEW0 395 aa16.49■□□□□ 0.23
C9orf3-213ENST00000471978 SLC24A4Q8NFF2 622 aa16.49■□□□□ 0.23
C9orf3-213ENST00000471978 OR1S2Q8NGQ3 325 aa16.49■□□□□ 0.23
C9orf3-213ENST00000471978 DYNC2LI1Q8TCX1 351 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms