RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 KIR2DL2P43627 348 aaPredicted RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 VDAC2P45880 294 aaPredicted RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 RPL30P62888 115 aaKnown RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 HBBP68871 147 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 GAGE13Q4V321 117 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 INO80CQ6PI98 192 aaPredicted RBP3.48□□□□□ -1.85
VPS50-210ENST00000471188 C17orf99Q6UX52 265 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 Q6ZR03 302 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 Q6ZS49 121 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 Q6ZSR6 202 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 PCP2Q8IVA1 136 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 AP5S1Q9NUS5 200 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 C1RLQ9NZP8 487 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 MPC1Q9Y5U8 109 aa3.48□□□□□ -1.85
VPS50-210ENST00000471188 ZNF716A6NP11 495 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 NKX2-8O15522 239 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 NCR2O95944 276 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 APOHP02749 345 aaPredicted RBP3.47□□□□□ -1.85
VPS50-210ENST00000471188 AREGP15514 252 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 CFHR2P36980 270 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 FXYD2P54710 66 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 CACNG7P62955 275 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 LILRA6Q6PI73 481 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 RASL11AQ6T310 242 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 TEPPQ6URK8 271 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 Q8N7P7 452 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 FAM169BQ8N8A8 192 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 OR4X2Q8NGF9 303 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 OR9G4Q8NGQ1 327 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 PLPPR2Q96GM1 343 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 GRAMD2BQ96HH9 432 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 ZNF391Q9UJN7 358 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 DOCK10Q96BY6 2186 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 LOC389332A0A1B0GUA5 103 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 hCG_38984A0A1B0GV85 526 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 A0A1W2PRD5 423 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 A0A1W2PRF3 423 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 A0A1W2PRM7 423 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 PRR33A8MZF0 331 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 GGTLC3B5MD39 225 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 C21orf140B9A014 251 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 TM4SF5O14894 197 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 OR2J3O76001 311 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 IGLV2-14P01704 120 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 CCL2P13500 99 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 TM4SF4P48230 202 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 FXYD7P58549 80 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 ODF1Q14990 250 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 DAZAP2Q15038 168 aaPredicted RBP3.47□□□□□ -1.85
VPS50-210ENST00000471188 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 SLC35E4Q6ICL7 350 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 FAM53AQ6NSI3 398 aaPredicted RBP3.47□□□□□ -1.85
VPS50-210ENST00000471188 PPP1R32Q7Z5V6 425 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 DUSP23Q9BVJ7 150 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 IL23AQ9NPF7 189 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 DLL3Q9NYJ7 618 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 IDI2-AS1Q9NZ38 188 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 ERG28Q9UKR5 140 aa3.47□□□□□ -1.85
VPS50-210ENST00000471188 INTS1Q8N201 2190 aaKnown RBP3.47□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A10PA6NDY2 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A18PA6NE21 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A16PA6NEW6 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 MANSC4A6NHS7 340 aaPredicted RBP3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A20PA6NIJ5 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A8PA6NJQ4 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A7PA6NKC0 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A22PA8MWA6 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A12PA8MX19 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A5PA8MXJ8 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A23PA8MXZ1 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 IGHV3-9P01782 118 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 OR9G9P0C7N8 305 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A15PP0C7V4 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A13PP0C7W8 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A14PP0C7W9 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A24PP0C7X0 464 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 CYB561P49447 251 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 GFERP55789 205 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 TMPRSS3P57727 454 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 RPL32P62910 135 aaKnown RBP3.46□□□□□ -1.85
VPS50-210ENST00000471188 UBE2L3P68036 154 aaKnown RBP3.46□□□□□ -1.85
VPS50-210ENST00000471188 DEFB103AP81534 67 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 OR1C1Q15619 314 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FOXI2Q6ZQN5 318 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 WFDC3Q8IUB2 231 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 VKORC1L1Q8N0U8 176 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 TEX29Q8N6K0 151 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 ZNF645Q8N7E2 425 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 WIPF2Q8TF74 440 aaPredicted RBP3.46□□□□□ -1.85
VPS50-210ENST00000471188 DPF1Q92782 380 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 NABP1Q96AH0 204 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 DAZAP1Q96EP5 407 aaKnown RBP3.46□□□□□ -1.85
VPS50-210ENST00000471188 TPPP3Q9BW30 176 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 C1QTNF4Q9BXJ3 329 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 FGF21Q9NSA1 209 aa3.46□□□□□ -1.85
VPS50-210ENST00000471188 AMMECR1Q9Y4X0 333 aaPredicted RBP3.46□□□□□ -1.85
VPS50-210ENST00000471188 C2orf16Q68DN1 1984 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 ABCA1O95477 2261 aa3.46□□□□□ -1.86
VPS50-210ENST00000471188 PI4KAP42356 2102 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms