RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 B3GALNT1O75752 331 aa16.1■□□□□ 0.17
TTC28-204ENST00000468807 APOHP02749 345 aaPredicted RBP16.1■□□□□ 0.17
TTC28-204ENST00000468807 CMC4P56277 68 aaPredicted RBP16.1■□□□□ 0.17
TTC28-204ENST00000468807 DIRAS2Q96HU8 199 aa16.1■□□□□ 0.17
TTC28-204ENST00000468807 NAA60Q9H7X0 242 aa16.1■□□□□ 0.17
TTC28-204ENST00000468807 MAP6D1Q9H9H5 199 aa16.1■□□□□ 0.17
TTC28-204ENST00000468807 DNASE2O00115 360 aaPredicted RBP16.09■□□□□ 0.17
TTC28-204ENST00000468807 TMEM50AO95807 157 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 AKAIN1P0CW23 69 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 FAM90A2PQ658T7 463 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 Q6ZRM9 215 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 OR4C16Q8NGL9 310 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 SMIM4Q8WVI0 70 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 RNF183Q96D59 192 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 RTBDNQ9BSG5 229 aaPredicted RBP16.09■□□□□ 0.17
TTC28-204ENST00000468807 TMEM222Q9H0R3 208 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 ZFAND3Q9H8U3 227 aa16.09■□□□□ 0.17
TTC28-204ENST00000468807 SCGB2A1O75556 95 aa16.08■□□□□ 0.16
TTC28-204ENST00000468807 DFFBO76075 338 aa16.08■□□□□ 0.16
TTC28-204ENST00000468807 EWSR1Q01844 656 aaKnown RBP eCLIP16.08■□□□□ 0.16
TTC28-204ENST00000468807 TNFRSF9Q07011 255 aa16.08■□□□□ 0.16
TTC28-204ENST00000468807 MLANAQ16655 118 aa16.08■□□□□ 0.16
TTC28-204ENST00000468807 FAM219AQ8IW50 185 aa16.08■□□□□ 0.16
TTC28-204ENST00000468807 LHFPL5Q8TAF8 219 aa16.08■□□□□ 0.16
TTC28-204ENST00000468807 MRPL36Q9P0J6 103 aaKnown RBP16.08■□□□□ 0.16
TTC28-204ENST00000468807 A0A1B0GU03 582 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 CDS2O95674 445 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 SPCS3P61009 180 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 TMEM268Q5VZI3 342 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 LILRB2Q8N423 598 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 RAB2BQ8WUD1 216 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 RBPMSQ93062 196 aaKnown RBP16.07■□□□□ 0.16
TTC28-204ENST00000468807 TMEM230Q96A57 120 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 CSTL1Q9H114 145 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 MS4A6AQ9H2W1 248 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 FNDC4Q9H6D8 234 aaPredicted RBP16.07■□□□□ 0.16
TTC28-204ENST00000468807 HEYLQ9NQ87 328 aaPredicted RBP16.07■□□□□ 0.16
TTC28-204ENST00000468807 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.07■□□□□ 0.16
TTC28-204ENST00000468807 CACNG5Q9UF02 275 aa16.07■□□□□ 0.16
TTC28-204ENST00000468807 MPTX1A8MV57 137 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 CLN5O75503 358 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 CD5P06127 495 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 DHODHQ02127 395 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 SURF2Q15527 256 aaPredicted RBP16.06■□□□□ 0.16
TTC28-204ENST00000468807 PVRIGQ6DKI7 326 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 SELENOHQ8IZQ5 122 aaKnown RBP16.06■□□□□ 0.16
TTC28-204ENST00000468807 GLYATL2Q8WU03 294 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 PRRT1Q99946 306 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 TMEM231Q9H6L2 316 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 VSIRQ9H7M9 311 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 CCDC59Q9P031 241 aaKnown RBP16.06■□□□□ 0.16
TTC28-204ENST00000468807 RABAC1Q9UI14 185 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 BIRC6Q9NR09 4857 aa16.06■□□□□ 0.16
TTC28-204ENST00000468807 NOL3O60936 208 aaKnown RBP16.05■□□□□ 0.16
TTC28-204ENST00000468807 NXPH3O95157 252 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 NPPCP23582 126 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 HTR2BP41595 481 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 LEMD1Q68G75 181 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 OR51S1Q8NGJ8 323 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 OR4X1Q8NH49 305 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 DYNC2LI1Q8TCX1 351 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 GPR146Q96CH1 333 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 METTL26Q96S19 204 aa16.05■□□□□ 0.16
TTC28-204ENST00000468807 RPS10-NUDT3A0A1W2PQS6 291 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 NUPR2A6NF83 97 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 CRYM-AS1A6NIL9 109 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 CEBPZOSA8MTT3 80 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 CTDSPLO15194 276 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 TIGITQ495A1 244 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 TMEM217Q8N7C4 229 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 OR52E5Q8NH55 327 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 MCUBQ9NWR8 336 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 GPR132Q9UNW8 380 aa16.04■□□□□ 0.16
TTC28-204ENST00000468807 A0A1W2PS18 150 aa16.03■□□□□ 0.16
TTC28-204ENST00000468807 RPL5P46777 297 aaKnown RBP16.03■□□□□ 0.16
TTC28-204ENST00000468807 TMBIM6P55061 237 aa16.03■□□□□ 0.16
TTC28-204ENST00000468807 DEFB131AP59861 70 aa16.03■□□□□ 0.16
TTC28-204ENST00000468807 BSXQ3C1V8 233 aa16.03■□□□□ 0.16
TTC28-204ENST00000468807 NARS2Q96I59 477 aaKnown RBP16.03■□□□□ 0.16
TTC28-204ENST00000468807 PRR13Q9NZ81 148 aa16.03■□□□□ 0.16
TTC28-204ENST00000468807 RABL2AQ9UBK7 228 aaPredicted RBP16.03■□□□□ 0.16
TTC28-204ENST00000468807 RABL2BQ9UNT1 228 aa16.03■□□□□ 0.16
TTC28-204ENST00000468807 FAM24BQ8N5W8 94 aa16.02■□□□□ 0.16
TTC28-204ENST00000468807 SLC24A4Q8NFF2 622 aa16.02■□□□□ 0.16
TTC28-204ENST00000468807 STXBP6Q8NFX7 210 aa16.02■□□□□ 0.16
TTC28-204ENST00000468807 RARRES2Q99969 163 aa16.02■□□□□ 0.16
TTC28-204ENST00000468807 RSL24D1Q9UHA3 163 aaKnown RBP16.02■□□□□ 0.16
TTC28-204ENST00000468807 SCP2D1Q9UJQ7 156 aa16.02■□□□□ 0.16
TTC28-204ENST00000468807 TRAV30A0A087WSZ9 112 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 ANKRD20A5PA0PJZ0 165 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 LY6G6CO95867 125 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 CA1P00915 261 aaPredicted RBP16.01■□□□□ 0.15
TTC28-204ENST00000468807 P2RY1P47900 373 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 AARDQ4LEZ3 155 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 BCL7BQ9BQE9 202 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 KCNIP3Q9Y2W7 256 aa16.01■□□□□ 0.15
TTC28-204ENST00000468807 IGKV1-17P01599 117 aa16■□□□□ 0.15
TTC28-204ENST00000468807 RND2P52198 227 aa16■□□□□ 0.15
TTC28-204ENST00000468807 CEMP1Q6PRD7 247 aaPredicted RBP16■□□□□ 0.15
TTC28-204ENST00000468807 GATAD1Q8WUU5 269 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms