RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PLET1Q6UQ28 207 aa8.4□□□□□ -1.06
MSH5-212ENST00000467319 C12orf45Q8N5I9 185 aaPredicted RBP8.4□□□□□ -1.06
MSH5-212ENST00000467319 PINX1Q96BK5 328 aaKnown RBP8.4□□□□□ -1.06
MSH5-212ENST00000467319 OR10C1Q96KK4 312 aa8.4□□□□□ -1.06
MSH5-212ENST00000467319 ZC4H2Q9NQZ6 224 aa8.4□□□□□ -1.06
MSH5-212ENST00000467319 C2orf70A6NJV1 201 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 SNRPGP15A8MWD9 76 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 INMT-MINDY4F8WBC2 141 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 CCSO14618 274 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 MED6O75586 246 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 LY86O95711 162 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 IAPPP10997 89 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 SPNP16150 400 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 EDN2P20800 178 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 TATDN3Q17R31 274 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 IAH1Q2TAA2 248 aaPredicted RBP8.39□□□□□ -1.07
MSH5-212ENST00000467319 Q56UQ5 140 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 PRSS54Q6PEW0 395 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 NOXA1Q86UR1 476 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 ZBTB8BQ8NAP8 495 aaPredicted RBP8.39□□□□□ -1.07
MSH5-212ENST00000467319 UBAC2Q8NBM4 344 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 OR4X1Q8NH49 305 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 CIB3Q96Q77 187 aaPredicted RBP8.39□□□□□ -1.07
MSH5-212ENST00000467319 OR4C12Q96R67 309 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 ELOVL1Q9BW60 279 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 MAGT1Q9H0U3 335 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 PEMTQ9UBM1 199 aa8.39□□□□□ -1.07
MSH5-212ENST00000467319 RCL1Q9Y2P8 373 aaKnown RBP8.39□□□□□ -1.07
MSH5-212ENST00000467319 IGHV3-35A0A0C4DH35 117 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 RPS10-NUDT3A0A1W2PQS6 291 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 C7orf66A4D0T2 115 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 NDUFA4O00483 81 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 NUPL2O15504 423 aaKnown RBP8.38□□□□□ -1.07
MSH5-212ENST00000467319 TMEM50AO95807 157 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 IFNA10P01566 189 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 IGKV1-17P01599 117 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 PRB2P02812 416 aaPredicted RBP8.38□□□□□ -1.07
MSH5-212ENST00000467319 SLC25A4P12235 298 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 NKX2-1P43699 371 aaPredicted RBP8.38□□□□□ -1.07
MSH5-212ENST00000467319 NPBWR1P48145 328 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 ELLP55199 621 aaPredicted RBP8.38□□□□□ -1.07
MSH5-212ENST00000467319 POLR2GP62487 172 aaKnown RBP eCLIP8.38□□□□□ -1.07
MSH5-212ENST00000467319 FAM106AQ4KMX7 169 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 SLC16A13Q7RTY0 426 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 HAPLN4Q86UW8 402 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 TMEM116Q8NCL8 245 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 CACNG8Q8WXS5 425 aa8.38□□□□□ -1.07
MSH5-212ENST00000467319 GPN1Q9HCN4 374 aaPredicted RBP8.38□□□□□ -1.07
MSH5-212ENST00000467319 ZMAT5Q9UDW3 170 aaKnown RBP8.38□□□□□ -1.07
MSH5-212ENST00000467319 WI2-2373I1.2A0A1W2PRP0 233 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 K7EIL1 84 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 SSSCA1O60232 199 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 GNG7O60262 68 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 CLN5O75503 358 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 MBPP02686 304 aaPredicted RBP8.37□□□□□ -1.07
MSH5-212ENST00000467319 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 C8orf88P0DMB2 117 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 FOLR2P14207 255 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 RND2P52198 227 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 PAX9P55771 341 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 RELQ04864 619 aaPredicted RBP8.37□□□□□ -1.07
MSH5-212ENST00000467319 CD69Q07108 199 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 IL15RAQ13261 267 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 MLANAQ16655 118 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 OR2K2Q8NGT1 345 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 C11orf1Q9H5F2 150 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 ZFAND3Q9H8U3 227 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 DAZ1Q9NQZ3 744 aaKnown RBP8.37□□□□□ -1.07
MSH5-212ENST00000467319 ZNF256Q9Y2P7 627 aaPredicted RBP8.37□□□□□ -1.07
MSH5-212ENST00000467319 UFC1Q9Y3C8 167 aa8.37□□□□□ -1.07
MSH5-212ENST00000467319 H3BP45 60 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 WRBO00258 174 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 CBLN1P23435 193 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 TAS2R30P59541 319 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 TM4SF20Q53R12 229 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 ZNF600Q6ZNG1 722 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 MARC2Q969Z3 335 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 C2orf50Q96LR7 162 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 RAB40CQ96S21 281 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 MLXQ9UH92 298 aa8.36□□□□□ -1.07
MSH5-212ENST00000467319 ZNF320A2RRD8 509 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 K7EMT4 169 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 TSC22D2O75157 780 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 SCAF4O95104 1147 aaKnown RBP8.35□□□□□ -1.07
MSH5-212ENST00000467319 IFNA4P05014 189 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 GPX4P36969 197 aaPredicted RBP8.35□□□□□ -1.07
MSH5-212ENST00000467319 DCTN2Q13561 401 aaKnown RBP8.35□□□□□ -1.07
MSH5-212ENST00000467319 ETFRF1Q6IPR1 90 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 TMEM14EPQ6UXP3 125 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 UXS1Q8NBZ7 420 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 OR1S2Q8NGQ3 325 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 SMIM8Q96KF7 97 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 TECRQ9NZ01 308 aaKnown RBP8.35□□□□□ -1.07
MSH5-212ENST00000467319 STRAPQ9Y3F4 350 aaKnown RBP8.35□□□□□ -1.07
MSH5-212ENST00000467319 SORL1Q92673 2214 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 TGP01266 2768 aa8.35□□□□□ -1.07
MSH5-212ENST00000467319 IGKV1D-37A0A075B6S9 117 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 IGHV3OR16-8A0A075B7F1 116 aa8.34□□□□□ -1.07
MSH5-212ENST00000467319 TRAV30A0A087WSZ9 112 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms