RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 SELENOKQ9Y6D0 94 aa9.83□□□□□ -0.84
HDAC1-203ENST00000463172 TRAV30A0A087WSZ9 112 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 LOC102724200A0A096LPH7 203 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-203ENST00000463172 IGHV7-4-1A0A0J9YVY3 117 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 ZNF207O43670 478 aaKnown RBP9.82□□□□□ -0.84
HDAC1-203ENST00000463172 IGHV3-48P01763 117 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 RNASE2P10153 161 aaKnown RBP9.82□□□□□ -0.84
HDAC1-203ENST00000463172 PAFAH1B2P68402 229 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 LINC00322Q6ZN03 302 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-203ENST00000463172 IL17DQ8TAD2 202 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 SLC25A21Q9BQT8 299 aaPredicted RBP9.82□□□□□ -0.84
HDAC1-203ENST00000463172 RHPN1-AS1Q9BWJ2 59 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 GGTLC1Q9BX51 225 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 SMPXQ9UHP9 88 aa9.82□□□□□ -0.84
HDAC1-203ENST00000463172 A0A0B4J2A0 478 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 A0A0G2JRQ6 117 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 DUXBA0A1W2PPF3 345 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 A0A1W2PS18 150 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 CLN5O75503 358 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 SLC25A4P12235 298 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 CCR6P51684 374 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 APOC4P55056 127 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 TMEM187Q14656 261 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 PVRIGQ6DKI7 326 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 TMED4Q7Z7H5 227 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 SLC24A4Q8NFF2 622 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 LHFPL5Q8TAF8 219 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 RNASEH2CQ8TDP1 164 aaKnown RBP9.81□□□□□ -0.84
HDAC1-203ENST00000463172 GPR146Q96CH1 333 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 FAM110AQ9BQ89 295 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 WFDC10AQ9H1F0 79 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 SHPKQ9UHJ6 478 aa9.81□□□□□ -0.84
HDAC1-203ENST00000463172 HUWE1Q7Z6Z7 4374 aaKnown RBP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 KMT2CQ8NEZ4 4911 aaKnown RBP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 DNAH7Q8WXX0 4024 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 IGHV3OR16-8A0A075B7F1 116 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 RBMY1BA6NDE4 496 aaKnown RBP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 RBMY1EA6NEQ0 496 aaKnown RBP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 CHEK1O14757 476 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 TMEM50AO95807 157 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 RBMY1DP0C7P1 496 aaKnown RBP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 KLF9Q13886 244 aaPredicted RBP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 SMCO1Q147U7 214 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 BSXQ3C1V8 233 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 C2orf83Q53S99 150 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 TMEM128Q5BJH2 165 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 TOMM20LQ6UXN7 152 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 Q6ZRM9 215 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 OR4X1Q8NH49 305 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 TMEM230Q96A57 120 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 PUS1Q9Y606 427 aaKnown RBP eCLIP9.8□□□□□ -0.84
HDAC1-203ENST00000463172 V9GYH0 126 aa9.8□□□□□ -0.84
HDAC1-203ENST00000463172 NPY1RP25929 384 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
HDAC1-203ENST00000463172 TRIQKQ629K1 86 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 CCDC190Q86UF4 302 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 OR1S1Q8NH92 325 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 TRIM63Q969Q1 353 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 METTL26Q96S19 204 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 RNF2Q99496 336 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 U3KQ87 197 aa9.79□□□□□ -0.84
HDAC1-203ENST00000463172 A0A1B0GU03 582 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 NAP1L6A6NFF2 107 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 CENPXA8MT69 81 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 DNASE2O00115 360 aaPredicted RBP9.78□□□□□ -0.84
HDAC1-203ENST00000463172 UBE2CO00762 179 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 IFNA10P01566 189 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 NPPCP23582 126 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 VAMP1P23763 118 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 EIF2B2P49770 351 aaKnown RBP9.78□□□□□ -0.84
HDAC1-203ENST00000463172 RPL11P62913 178 aaKnown RBP9.78□□□□□ -0.84
HDAC1-203ENST00000463172 TNFRSF9Q07011 255 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 CASC10Q5T4H9 136 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 OR1S2Q8NGQ3 325 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 GRAMD2BQ96HH9 432 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 RBM38Q9H0Z9 239 aaKnown RBP9.78□□□□□ -0.84
HDAC1-203ENST00000463172 EDA2RQ9HAV5 297 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 NDUFA13Q9P0J0 144 aa9.78□□□□□ -0.84
HDAC1-203ENST00000463172 MED6O75586 246 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 SUPT4H1P63272 117 aaKnown RBP9.77□□□□□ -0.85
HDAC1-203ENST00000463172 RBMS2Q15434 407 aaKnown RBP9.77□□□□□ -0.85
HDAC1-203ENST00000463172 ZNF79Q15937 498 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 NMSQ5H8A3 153 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 TCF24Q7RTU0 167 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 LYZL2Q7Z4W2 148 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 CENPSQ8N2Z9 138 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 STPG3Q8N7X2 389 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 DTD1Q8TEA8 209 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 Q8WTZ3 238 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.85
HDAC1-203ENST00000463172 HSPB7Q9UBY9 170 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 UBQLN2Q9UHD9 624 aa9.77□□□□□ -0.85
HDAC1-203ENST00000463172 IGHV3-49A0A0A0MS15 119 aa9.76□□□□□ -0.85
HDAC1-203ENST00000463172 TRAV2A0A0B4J234 112 aa9.76□□□□□ -0.85
HDAC1-203ENST00000463172 KIR2DL5BA0A0G2JN68 375 aa9.76□□□□□ -0.85
HDAC1-203ENST00000463172 KIR2DL5BA0A0G2JPC4 375 aa9.76□□□□□ -0.85
HDAC1-203ENST00000463172 OR10J1P30954 320 aa9.76□□□□□ -0.85
HDAC1-203ENST00000463172 TFPI2P48307 235 aa9.76□□□□□ -0.85
HDAC1-203ENST00000463172 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms