RNA–Protein interactions for RNA: ENST00000460686.1

FAM228B-201, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 357 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-201ENST00000460686 RNF5Q99942 180 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 ZNF471Q9BX82 626 aaPredicted RBP3.82□□□□□ -1.8
FAM228B-201ENST00000460686 REG4Q9BYZ8 158 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 TMEM133Q9H2Q1 129 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 PATZ1Q9HBE1 687 aaKnown RBP3.82□□□□□ -1.8
FAM228B-201ENST00000460686 C19orf12Q9NSK7 152 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 CTSZQ9UBR2 303 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 LSM5Q9Y4Y9 91 aaKnown RBP3.82□□□□□ -1.8
FAM228B-201ENST00000460686 DSCAML1Q8TD84 2053 aa3.82□□□□□ -1.8
FAM228B-201ENST00000460686 LOC105371242A0A075B767 164 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 IGHV3-43A0A0B4J1X8 118 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PPIAL4CA0A0B4J2A2 164 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 LINC00862A6NCI5 91 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 A8MXK9 166 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 OOSP1A8MZH6 123 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 ENSAO43768 121 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 CD5LO43866 347 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 CHST1O43916 411 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 FCGR3BO75015 233 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 FOXH1O75593 365 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 OR2C1O95371 312 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 KRASP01116 189 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 IGKV1-39P01597 117 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 IGKV1-5P01602 117 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 IGKV1D-39P04432 117 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 SEC11BP0C7V7 166 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 SAA2P0DJI9 122 aaPredicted RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PPIAL4GP0DN37 164 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 IGHV1-8P0DP01 117 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 IGHV3-43DP0DP04 118 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 AZU1P20160 251 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 NFYBP25208 207 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 CEACAM3P40198 252 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 HTR2BP41595 481 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 GPR6P46095 362 aaPredicted RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 LGALS7P47929 136 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 DLX6P56179 175 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 SPCS3P61009 180 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 UBE2KP61086 200 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 RPL30P62888 115 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 TNFRSF9Q07011 255 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PNRC1Q12796 327 aaPredicted RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 EXOSC2Q13868 293 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 ZNF273Q14593 569 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 ATP6V1FQ16864 119 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 LTC4SQ16873 150 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 TCTEX1D4Q5JR98 221 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 NCR3LG1Q68D85 454 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 CLEC2AQ6UVW9 174 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 LYPD2Q6UXB3 125 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PDPNQ86YL7 162 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PDZD9Q8IXQ8 264 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 OR8H3Q8N146 312 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 ABHD12Q8N2K0 398 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 MAPKAPK5-AS1Q8N8E1 139 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 OR4A16Q8NH70 328 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PINX1Q96BK5 328 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 GNPNAT1Q96EK6 184 aaPredicted RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 SAT2Q96F10 170 aaPredicted RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 FAM210AQ96ND0 272 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 TSNAXQ99598 290 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 ZNF251Q9BRH9 671 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 GGACTQ9BVM4 153 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PARD6GQ9BYG4 376 aaPredicted RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PARP12Q9H0J9 701 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 C11orf1Q9H5F2 150 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 DCAF16Q9NXF7 216 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 OR5AC2Q9NZP5 309 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 PRNDQ9UKY0 176 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 RCL1Q9Y2P8 373 aaKnown RBP3.81□□□□□ -1.8
FAM228B-201ENST00000460686 ZNF257Q9Y2Q1 563 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 KPTNQ9Y664 436 aa3.81□□□□□ -1.8
FAM228B-201ENST00000460686 A0A096LNT2 108 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 UMAD1C9J7I0 102 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 INS-IGF2F8WCM5 200 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 TRIM77I1YAP6 450 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 SSSCA1O60232 199 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 RAMP3O60896 148 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 S1PR2O95136 353 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 SCGB1D1O95968 90 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 IFNA5P01569 189 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 TFF1P04155 84 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 OR8U8P0C7N1 319 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 CT45A6P0DMU7 189 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 CT45A5P0DMU8 189 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 CT45A7P0DMV0 189 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 SLC25A16P16260 332 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 USF1P22415 310 aaPredicted RBP3.8□□□□□ -1.8
FAM228B-201ENST00000460686 OMGP23515 440 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 GATA2P23769 480 aaPredicted RBP3.8□□□□□ -1.8
FAM228B-201ENST00000460686 PRTN3P24158 256 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 SULT1A1P50225 295 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 CAV2P51636 162 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 POLR2GP62487 172 aaKnown RBP eCLIP3.8□□□□□ -1.8
FAM228B-201ENST00000460686 RAB11AP62491 216 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 EWSR1Q01844 656 aaKnown RBP eCLIP3.8□□□□□ -1.8
FAM228B-201ENST00000460686 LOXL1Q08397 574 aaPredicted RBP3.8□□□□□ -1.8
FAM228B-201ENST00000460686 MINOS1Q5TGZ0 78 aa3.8□□□□□ -1.8
FAM228B-201ENST00000460686 PRAMEF5Q5TYX0 476 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms