RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 SPNP16150 400 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 DEFB121Q5J5C9 76 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 RNASEH2CQ8TDP1 164 aaKnown RBP16.54■□□□□ 0.24
SSNA1-202ENST00000459860 CHRDL1Q9BU40 450 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 ZNF436Q9C0F3 470 aaPredicted RBP16.54■□□□□ 0.24
SSNA1-202ENST00000459860 U3KQ87 197 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 DNAH9Q9NYC9 4486 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 RYR3Q15413 4870 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 NBEAL2Q6ZNJ1 2754 aa16.54■□□□□ 0.24
SSNA1-202ENST00000459860 F8W735 103 aaPredicted RBP16.53■□□□□ 0.24
SSNA1-202ENST00000459860 NDUFA4O00483 81 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 ADAP1O75689 374 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 FOLR2P14207 255 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 DEFA1P59665 94 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 DEFA3P59666 94 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 LCN12Q6JVE5 192 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 OR2K2Q8NGT1 345 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 MITD1Q8WV92 249 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 TMEM190Q8WZ59 177 aa16.53■□□□□ 0.24
SSNA1-202ENST00000459860 CTSGP08311 255 aa16.52■□□□□ 0.24
SSNA1-202ENST00000459860 GP9P14770 177 aa16.52■□□□□ 0.24
SSNA1-202ENST00000459860 ELLP55199 621 aaPredicted RBP16.52■□□□□ 0.24
SSNA1-202ENST00000459860 ATP5IP56385 69 aaPredicted RBP16.52■□□□□ 0.24
SSNA1-202ENST00000459860 ETFRF1Q6IPR1 90 aa16.52■□□□□ 0.24
SSNA1-202ENST00000459860 UNQ9165/PRO28630Q6UXU0 137 aa16.52■□□□□ 0.24
SSNA1-202ENST00000459860 OR52B4Q8NGK2 314 aa16.52■□□□□ 0.24
SSNA1-202ENST00000459860 MARC2Q969Z3 335 aa16.52■□□□□ 0.24
SSNA1-202ENST00000459860 CIB3Q96Q77 187 aaPredicted RBP16.52■□□□□ 0.24
SSNA1-202ENST00000459860 TMEM213A2RRL7 107 aa16.51■□□□□ 0.23
SSNA1-202ENST00000459860 CBLN1P23435 193 aa16.51■□□□□ 0.23
SSNA1-202ENST00000459860 ADMP35318 185 aa16.51■□□□□ 0.23
SSNA1-202ENST00000459860 C20orf24Q9BUV8 137 aa16.51■□□□□ 0.23
SSNA1-202ENST00000459860 TECRQ9NZ01 308 aaKnown RBP16.51■□□□□ 0.23
SSNA1-202ENST00000459860 SORL1Q92673 2214 aa16.5■□□□□ 0.23
SSNA1-202ENST00000459860 YIF1AO95070 293 aa16.5■□□□□ 0.23
SSNA1-202ENST00000459860 IAPPP10997 89 aa16.5■□□□□ 0.23
SSNA1-202ENST00000459860 SLC25A4P12235 298 aa16.5■□□□□ 0.23
SSNA1-202ENST00000459860 RPP30P78346 268 aaKnown RBP16.5■□□□□ 0.23
SSNA1-202ENST00000459860 ZNF431Q8TF32 576 aaPredicted RBP16.5■□□□□ 0.23
SSNA1-202ENST00000459860 FNDC4Q9H6D8 234 aaPredicted RBP16.5■□□□□ 0.23
SSNA1-202ENST00000459860 DAZ1Q9NQZ3 744 aaKnown RBP16.5■□□□□ 0.23
SSNA1-202ENST00000459860 WRBO00258 174 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 SYNGR2O43760 224 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 IFNA4P05014 189 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 RAB11AP62491 216 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 TM4SF20Q53R12 229 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 C11orf87Q6NUJ2 197 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 OR4X1Q8NH49 305 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 CACNG8Q8WXS5 425 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 SEC22CQ9BRL7 303 aa16.49■□□□□ 0.23
SSNA1-202ENST00000459860 MRPL27Q9P0M9 148 aaKnown RBP16.49■□□□□ 0.23
SSNA1-202ENST00000459860 CLN5O75503 358 aa16.48■□□□□ 0.23
SSNA1-202ENST00000459860 IFITM3Q01628 133 aa16.48■□□□□ 0.23
SSNA1-202ENST00000459860 IAH1Q2TAA2 248 aaPredicted RBP16.48■□□□□ 0.23
SSNA1-202ENST00000459860 UXS1Q8NBZ7 420 aa16.48■□□□□ 0.23
SSNA1-202ENST00000459860 MAGT1Q9H0U3 335 aa16.48■□□□□ 0.23
SSNA1-202ENST00000459860 PAIP2BQ9ULR5 123 aaKnown RBP16.48■□□□□ 0.23
SSNA1-202ENST00000459860 TRAV30A0A087WSZ9 112 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 TMEM50AO95807 157 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 EDN2P20800 178 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 NKX2-1P43699 371 aaPredicted RBP16.47■□□□□ 0.23
SSNA1-202ENST00000459860 DEFB114Q30KQ6 69 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 CD300EQ496F6 205 aaPredicted RBP16.47■□□□□ 0.23
SSNA1-202ENST00000459860 ADAMTSL5Q6ZMM2 481 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 ZNF600Q6ZNG1 722 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 TMEM170AQ8WVE7 144 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 GINS3Q9BRX5 216 aa16.47■□□□□ 0.23
SSNA1-202ENST00000459860 C15orf62A8K5M9 175 aa16.46■□□□□ 0.23
SSNA1-202ENST00000459860 MPTX1A8MV57 137 aa16.46■□□□□ 0.23
SSNA1-202ENST00000459860 K7EMT4 169 aa16.46■□□□□ 0.23
SSNA1-202ENST00000459860 MLANAQ16655 118 aa16.46■□□□□ 0.23
SSNA1-202ENST00000459860 GTSCR1Q86UQ5 136 aa16.46■□□□□ 0.23
SSNA1-202ENST00000459860 C12orf45Q8N5I9 185 aaPredicted RBP16.46■□□□□ 0.23
SSNA1-202ENST00000459860 GPN1Q9HCN4 374 aaPredicted RBP16.46■□□□□ 0.23
SSNA1-202ENST00000459860 SMAD5-AS1Q9Y6J3 95 aa16.46■□□□□ 0.23
SSNA1-202ENST00000459860 IGHV3OR16-8A0A075B7F1 116 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 SCGB1D2O95969 90 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 IL5P05113 134 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 RND2P52198 227 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 CD69Q07108 199 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 PRSS54Q6PEW0 395 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 BTNL8Q6UX41 500 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 SLC16A13Q7RTY0 426 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 NRARPQ7Z6K4 114 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 OR4D5Q8NGN0 318 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 MRPL36Q9P0J6 103 aaKnown RBP16.45■□□□□ 0.22
SSNA1-202ENST00000459860 GSKIPQ9P0R6 139 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 MLXQ9UH92 298 aa16.45■□□□□ 0.22
SSNA1-202ENST00000459860 COL7A1Q02388 2944 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 FAM25EA8MYX2 175 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 C8orf88P0DMB2 117 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 ID3Q02535 119 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 GUCA2BQ16661 112 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 ZBTB8BQ8NAP8 495 aaPredicted RBP16.44■□□□□ 0.22
SSNA1-202ENST00000459860 TMEM116Q8NCL8 245 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 OR1S2Q8NGQ3 325 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 ACY3Q96HD9 319 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 SLC35E1Q96K37 410 aa16.44■□□□□ 0.22
SSNA1-202ENST00000459860 LSM4Q9Y4Z0 139 aaKnown RBP16.44■□□□□ 0.22
SSNA1-202ENST00000459860 IZUMO1RA6ND01 250 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms