RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 WFDC10AQ9H1F0 79 aa7.45□□□□□ -1.22
HDLBP-228ENST00000459788 VSIRQ9H7M9 311 aa7.45□□□□□ -1.22
HDLBP-228ENST00000459788 KCNIP3Q9Y2W7 256 aa7.45□□□□□ -1.22
HDLBP-228ENST00000459788 TMEM56-RWDD3S4R434 201 aa7.45□□□□□ -1.22
HDLBP-228ENST00000459788 RPS10-NUDT3A0A1W2PQS6 291 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 A0A1W2PS18 150 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 CLN5O75503 358 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 DFFBO76075 338 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 TMEM50AO95807 157 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 HOXA1P49639 335 aaPredicted RBP7.44□□□□□ -1.22
HDLBP-228ENST00000459788 SRPXP78539 464 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 ODF3L2Q3SX64 289 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 C2orf83Q53S99 150 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 RNASE12Q5GAN4 147 aaKnown RBP7.44□□□□□ -1.22
HDLBP-228ENST00000459788 FAM90A2PQ658T7 463 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 OR4C16Q8NGL9 310 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 RNASE11Q8TAA1 199 aaKnown RBP7.44□□□□□ -1.22
HDLBP-228ENST00000459788 RNASEH2CQ8TDP1 164 aaKnown RBP7.44□□□□□ -1.22
HDLBP-228ENST00000459788 ZNF414Q96IQ9 312 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 OVOL2Q9BRP0 275 aa7.44□□□□□ -1.22
HDLBP-228ENST00000459788 SLIRPQ9GZT3 109 aaKnown RBP7.44□□□□□ -1.22
HDLBP-228ENST00000459788 IGHV3-21A0A0B4J1V1 117 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 YIF1AO95070 293 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 OR5AC1P0C628 307 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 SLC25A4P12235 298 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 FAUP35544 74 aaKnown RBP7.43□□□□□ -1.22
HDLBP-228ENST00000459788 ETV6P41212 452 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 AP3S2P59780 193 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 TNFRSF9Q07011 255 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 ETFRF1Q6IPR1 90 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 TOMM20LQ6UXN7 152 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 SELENOHQ8IZQ5 122 aaKnown RBP7.43□□□□□ -1.22
HDLBP-228ENST00000459788 STPG3Q8N7X2 389 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 PINX1Q96BK5 328 aaKnown RBP7.43□□□□□ -1.22
HDLBP-228ENST00000459788 RNF2Q99496 336 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 SACSQ9NZJ4 4579 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 DNAH1Q9P2D7 4330 aa7.43□□□□□ -1.22
HDLBP-228ENST00000459788 A0A0B4J2A0 478 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 DUXBA0A1W2PPF3 345 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 H3BMQ9 156 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 SPRY2O43597 315 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 JTBO76095 146 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 ANXA3P12429 323 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 IZUMO4Q1ZYL8 232 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 SP6Q3SY56 376 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 TMEM217Q8N7C4 229 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 OR51S1Q8NGJ8 323 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 OR1S2Q8NGQ3 325 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 GATAD1Q8WUU5 269 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 RNF183Q96D59 192 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 NARS2Q96I59 477 aaKnown RBP7.42□□□□□ -1.22
HDLBP-228ENST00000459788 MAP6D1Q9H9H5 199 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 RETNQ9HD89 108 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 SHPKQ9UHJ6 478 aa7.42□□□□□ -1.22
HDLBP-228ENST00000459788 A0A0G2JRQ6 117 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 FABP12A6NFH5 140 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 ZNF701M0R085 212 aaPredicted RBP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 SULT1A3P0DMM9 295 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 SULT1A4P0DMN0 295 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 NPPCP23582 126 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 CRYBB3P26998 211 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 TNFSF8P32971 234 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 OPRK1P41145 380 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 EIF2B2P49770 351 aaKnown RBP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 CCR6P51684 374 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 YPEL3P61236 119 aaPredicted RBP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 TMEM187Q14656 261 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 TMEM41BQ5BJD5 291 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 NMSQ5H8A3 153 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 TMEM268Q5VZI3 342 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 ZFAND6Q6FIF0 208 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 Q6ZRM9 215 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 MCFD2Q8NI22 146 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 LHFPL5Q8TAF8 219 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 GRAMD2BQ96HH9 432 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 METTL26Q96S19 204 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 FNDC4Q9H6D8 234 aaPredicted RBP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 SEPSECSQ9HD40 501 aaKnown RBP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 HEYLQ9NQ87 328 aaPredicted RBP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 CACNG5Q9UF02 275 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 PUS1Q9Y606 427 aaKnown RBP eCLIP7.41□□□□□ -1.22
HDLBP-228ENST00000459788 U3KQ87 197 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 RYR2Q92736 4967 aa7.41□□□□□ -1.22
HDLBP-228ENST00000459788 ZNF207O43670 478 aaKnown RBP7.4□□□□□ -1.22
HDLBP-228ENST00000459788 SLC25A6P12236 298 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 AP2S1P53680 142 aaPredicted RBP7.4□□□□□ -1.22
HDLBP-228ENST00000459788 SPINK9Q5DT21 86 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 FAAP20Q6NZ36 180 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 TCF24Q7RTU0 167 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 SLC24A4Q8NFF2 622 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 GPR146Q96CH1 333 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 SLC25A21Q9BQT8 299 aaPredicted RBP7.4□□□□□ -1.22
HDLBP-228ENST00000459788 CSTL1Q9H114 145 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 HSPB7Q9UBY9 170 aa7.4□□□□□ -1.22
HDLBP-228ENST00000459788 AGRNO00468 2067 aa7.4□□□□□ -1.23
HDLBP-228ENST00000459788 IGHV3OR16-8A0A075B7F1 116 aa7.39□□□□□ -1.23
HDLBP-228ENST00000459788 A0A1B0GU03 582 aa7.39□□□□□ -1.23
HDLBP-228ENST00000459788 HELTA6NFD8 242 aa7.39□□□□□ -1.23
HDLBP-228ENST00000459788 CEBPZOSA8MTT3 80 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms