RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 C2orf91Q6ZV80 131 aa11.54□□□□□ -0.56
TOP3B-214ENST00000457270 BHLHA15Q7RTS1 189 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-214ENST00000457270 VSTM2AQ8TAG5 236 aa11.54□□□□□ -0.56
TOP3B-214ENST00000457270 H1FXQ92522 213 aaKnown RBP11.54□□□□□ -0.56
TOP3B-214ENST00000457270 MAP1LC3CQ9BXW4 147 aa11.54□□□□□ -0.56
TOP3B-214ENST00000457270 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-214ENST00000457270 TET2Q6N021 2002 aaPredicted RBP11.54□□□□□ -0.56
TOP3B-214ENST00000457270 PSMB11A5LHX3 300 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 C8orf88P0DMB2 117 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 CAMPP49913 170 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 TRAT1Q6PIZ9 186 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 OR13A1Q8NGR1 328 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 SPAARA0A1B0GVQ0 90 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 K7EQM0 130 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
TOP3B-214ENST00000457270 KLF7O75840 302 aaPredicted RBP11.53□□□□□ -0.56
TOP3B-214ENST00000457270 KIR2DS2P43631 304 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 FOXE3Q13461 319 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 CD300EQ496F6 205 aaPredicted RBP11.53□□□□□ -0.56
TOP3B-214ENST00000457270 Q6ZR03 302 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 SSX8Q7RTT4 187 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 SLC25A33Q9BSK2 321 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 HILPDAQ9Y5L2 63 aa11.53□□□□□ -0.56
TOP3B-214ENST00000457270 HCFC1P51610 2035 aa11.52□□□□□ -0.56
TOP3B-214ENST00000457270 VWC2LB2RUY7 222 aa11.52□□□□□ -0.56
TOP3B-214ENST00000457270 C15orf65H3BRN8 121 aa11.52□□□□□ -0.56
TOP3B-214ENST00000457270 SPINT2O43291 252 aa11.52□□□□□ -0.56
TOP3B-214ENST00000457270 HBBP68871 147 aa11.52□□□□□ -0.56
TOP3B-214ENST00000457270 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.56
TOP3B-214ENST00000457270 C7orf69Q9H7B7 122 aa11.52□□□□□ -0.56
TOP3B-214ENST00000457270 HSPE1P61604 102 aaKnown RBP11.52□□□□□ -0.57
TOP3B-214ENST00000457270 CCDC144NLQ6NUI1 221 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 ENY2Q9NPA8 101 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 COLQQ9Y215 455 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-214ENST00000457270 AMMECR1Q9Y4X0 333 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-214ENST00000457270 SOX21Q9Y651 276 aaPredicted RBP11.52□□□□□ -0.57
TOP3B-214ENST00000457270 FTH1P19P0C7X4 201 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 KIR3DS1Q14943 382 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 LINC01545Q5VT33 79 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 LINC00479Q96M42 142 aa11.52□□□□□ -0.57
TOP3B-214ENST00000457270 RFESDQ8TAC1 157 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 S1PR3Q99500 378 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 HSPB8Q9UJY1 196 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 GRPP07492 148 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 VEGFBP49765 207 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 GUSBP11Q6P575 273 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 FAM167A-AS1Q96KT0 104 aa11.51□□□□□ -0.57
TOP3B-214ENST00000457270 IGKV1OR2-108A0A075B7D4 117 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 FBLL1A6NHQ2 334 aaKnown RBP11.5□□□□□ -0.57
TOP3B-214ENST00000457270 ASPHD1Q5U4P2 390 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 FAM90A1Q86YD7 464 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 TPRX1Q8N7U7 411 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 GEMIN7Q9H840 131 aaKnown RBP11.5□□□□□ -0.57
TOP3B-214ENST00000457270 R4GN57 208 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 SDK2Q58EX2 2172 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 PEX7O00628 323 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 PRR31Q5SQ13 230 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 DDB2Q92466 427 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 SLC25A2Q9BXI2 301 aa11.5□□□□□ -0.57
TOP3B-214ENST00000457270 WNT9BO14905 357 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 FABP2P12104 132 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 LYSMD4Q5XG99 296 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 BLNKQ8WV28 456 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 DPF1Q92782 380 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 FREM1Q5H8C1 2179 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 J3QR89 54 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 AGFG2O95081 481 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 UBE2L3P68036 154 aaKnown RBP11.49□□□□□ -0.57
TOP3B-214ENST00000457270 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 ZNF329Q86UD4 541 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 TIMM8BQ9Y5J9 83 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-214ENST00000457270 PINLYPA6NC86 204 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 IQCF6A8MYZ5 107 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
TOP3B-214ENST00000457270 IL11RAQ14626 422 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 TBC1D28Q2M2D7 210 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 CT83Q5H943 113 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 LRRC29Q8WV35 223 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 NANOS1Q8WY41 292 aaKnown RBP11.49□□□□□ -0.57
TOP3B-214ENST00000457270 PLPPR2Q96GM1 343 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 FAM234AQ9H0X4 552 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
TOP3B-214ENST00000457270 IGHV3-64DA0A0J9YX35 117 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 ATP5IP56385 69 aaPredicted RBP11.48□□□□□ -0.57
TOP3B-214ENST00000457270 RPL39P5Q59GN2 51 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 FA2HQ7L5A8 372 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 MDP1Q86V88 176 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 C11orf53Q8IXP5 236 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 MRAP2Q96G30 205 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 CACNA1DQ01668 2161 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 SRYQ05066 204 aa11.48□□□□□ -0.57
TOP3B-214ENST00000457270 ZNF257Q9Y2Q1 563 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms