RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 IDI2-AS1Q9NZ38 188 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 C15orf61A6NNL5 157 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 PMCHP20382 165 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 CD24P25063 80 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 YPEL3P61236 119 aaPredicted RBP10.09□□□□□ -0.79
LINC00959-201ENST00000456581 SSBP2P81877 361 aaPredicted RBP10.09□□□□□ -0.79
LINC00959-201ENST00000456581 ZNF788Q6ZQV5 615 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 DDB2Q92466 427 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 V9GYV3 84 aa10.09□□□□□ -0.79
LINC00959-201ENST00000456581 FLNCQ14315 2725 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 GGTLC3B5MD39 225 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 LYNX1G3V0Z9 82 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 LINC00869P0C866 280 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 LYNX1P0DP58 116 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 MGST1P10620 155 aaKnown RBP10.08□□□□□ -0.8
LINC00959-201ENST00000456581 LYPD2Q6UXB3 125 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 SAP30LQ9HAJ7 183 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 NAT8BQ9UHF3 227 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 TRGV10A0A0A0MS01 117 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 F2RL2O00254 374 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 CCL3L1P16619 93 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 BRS3P32247 399 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 REG1BP48304 166 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 ERASQ7Z444 233 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 LPAR2Q9HBW0 351 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 SPG11Q96JI7 2443 aa10.08□□□□□ -0.8
LINC00959-201ENST00000456581 KBTBD11-OT1A0A1B0GTJ5 212 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.07□□□□□ -0.8
LINC00959-201ENST00000456581 MPDU1O75352 247 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 RHOBP62745 196 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 PRB3Q04118 309 aaPredicted RBP10.07□□□□□ -0.8
LINC00959-201ENST00000456581 RBPJQ06330 500 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 CR1LQ2VPA4 569 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 VKORC1Q9BQB6 163 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 SERTAD4Q9NUC0 356 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 OR51B2Q9Y5P1 312 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 A0A1W2PN81 502 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 E7EUB6 86 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 CCL21O00585 134 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 SIAH2O43255 324 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 GNG4P50150 75 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 SUMO1P63165 101 aaKnown RBP10.07□□□□□ -0.8
LINC00959-201ENST00000456581 RPEL1Q2QD12 228 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 AARDQ4LEZ3 155 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 NABP2Q9BQ15 211 aa10.07□□□□□ -0.8
LINC00959-201ENST00000456581 HELTA6NFD8 242 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 DLX1P56177 255 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 TPPP2P59282 170 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
LINC00959-201ENST00000456581 LY6DQ14210 128 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 TCTEX1D1Q8N7M0 179 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 OR5AU1Q8NGC0 362 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 OR2T6Q8NHC8 308 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 RNASE6Q93091 150 aaKnown RBP10.06□□□□□ -0.8
LINC00959-201ENST00000456581 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 DLEU1O43261 78 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 SELENOTP62341 195 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 MRPS11P82912 194 aaKnown RBP10.06□□□□□ -0.8
LINC00959-201ENST00000456581 PRR20EP86478 221 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 PRR20CP86479 221 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 PRR20DP86480 221 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 PRR20BP86481 221 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 PRR20AP86496 221 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 STPG4Q8N801 248 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 OR4S2Q8NH73 311 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 TMEM14BQ9NUH8 114 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 TBL2Q9Y4P3 447 aaKnown RBP10.06□□□□□ -0.8
LINC00959-201ENST00000456581 CACNA1BQ00975 2339 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 J3QR06 171 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 TNFRSF1AP19438 455 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 HSPE1P61604 102 aaKnown RBP10.06□□□□□ -0.8
LINC00959-201ENST00000456581 DYNLRB1Q9NP97 96 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 ENY2Q9NPA8 101 aa10.06□□□□□ -0.8
LINC00959-201ENST00000456581 PYYP10082 97 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 TMEM249Q2WGJ8 235 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 C10orf55Q5SWW7 151 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
LINC00959-201ENST00000456581 GOLT1BQ9Y3E0 138 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 VPS13CQ709C8 3753 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 IGSF10Q6WRI0 2623 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 TMEM178BH3BS89 294 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 APELAP0DMC3 54 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 NTF3P20783 257 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 SRIP30626 198 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 GPR6P46095 362 aaPredicted RBP10.05□□□□□ -0.8
LINC00959-201ENST00000456581 TEX36Q5VZQ5 186 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 OR52E5Q8NH55 327 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 H1FXQ92522 213 aaKnown RBP10.05□□□□□ -0.8
LINC00959-201ENST00000456581 MIEN1Q9BRT3 115 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 VAMP8Q9BV40 100 aa10.05□□□□□ -0.8
LINC00959-201ENST00000456581 LY6HO94772 140 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 AMTP48728 403 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 DIAPH2-AS1Q14236 149 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 RUSC1-AS1Q66K80 236 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 C19orf35Q6ZS72 473 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 Q71RC1 249 aaPredicted RBP10.04□□□□□ -0.8
LINC00959-201ENST00000456581 CTSZQ9UBR2 303 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms