RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 UHRF2Q96PU4 802 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 TMEM167BQ9NRX6 74 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 ATRXP46100 2492 aa14.86□□□□□ -0.03
SEMA3B-209ENST00000456560 IGHV1-69-2A0A0G2JMI3 117 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 A0A1W2PN81 502 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 PSG5Q15238 335 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 LY96Q9Y6Y9 160 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 C9JCJ5 164 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 IGHV1-8P0DP01 117 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 ADMP35318 185 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 WT1-ASQ06250 92 aa14.85□□□□□ -0.03
SEMA3B-209ENST00000456560 KIR2DL5BA0A0G2JN68 375 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 KIR2DL5BA0A0G2JPC4 375 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 B9A039 149 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 G0S2P27469 103 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 KIR2DL5AQ8N109 375 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 OR10G8Q8NGN5 311 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 OR2T6Q8NHC8 308 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 ITPR1Q14643 2758 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 ARFGEF3Q5TH69 2177 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 PSMB11A5LHX3 300 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 K7EN84 100 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 HNF1AP20823 631 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 PQLC2Q6ZP29 291 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 CMTM2Q8TAZ6 248 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 TBX15Q96SF7 602 aa14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 ZNF430Q9H8G1 570 aaPredicted RBP14.84□□□□□ -0.03
SEMA3B-209ENST00000456560 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.83□□□□□ -0.04
SEMA3B-209ENST00000456560 CD3EP07766 207 aa14.83□□□□□ -0.04
SEMA3B-209ENST00000456560 MC5RP33032 325 aa14.83□□□□□ -0.04
SEMA3B-209ENST00000456560 MRGPRG-AS1Q2M3A8 158 aa14.83□□□□□ -0.04
SEMA3B-209ENST00000456560 HLA-DRB5Q30154 266 aa14.83□□□□□ -0.04
SEMA3B-209ENST00000456560 C10orf55Q5SWW7 151 aa14.83□□□□□ -0.04
SEMA3B-209ENST00000456560 GRIFINA4D1Z8 144 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 PLAUP00749 431 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 RITA1Q96K30 269 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 SLC25A33Q9BSK2 321 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 TMEM133Q9H2Q1 129 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 SPTA1P02549 2419 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 ACACBO00763 2458 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 CASP6P55212 293 aa14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 YPEL3P61236 119 aaPredicted RBP14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 EAF1Q96JC9 268 aaPredicted RBP14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 FNDC4Q9H6D8 234 aaPredicted RBP14.82□□□□□ -0.04
SEMA3B-209ENST00000456560 C8orf88P0DMB2 117 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 RAB4AP20338 218 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 TAS2R45P59539 299 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 MRPL32Q9BYC8 188 aaKnown RBP14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 PKDREJQ9NTG1 2253 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 PPOXP50336 477 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 SSBP2P81877 361 aaPredicted RBP14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 VMA21Q3ZAQ7 101 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 ZNF705AQ6ZN79 300 aaPredicted RBP14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 FAM167A-AS1Q96KT0 104 aa14.81□□□□□ -0.04
SEMA3B-209ENST00000456560 SLC25A17O43808 307 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 OR7C2O60412 319 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 LGALS7P47929 136 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 ZNF90Q03938 601 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 RNF2Q99496 336 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 PKD1L2Q7Z442 2459 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 CRYBB3P26998 211 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 SUB1P53999 127 aaKnown RBP eCLIP14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 TPPP2P59282 170 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 TOMM20LQ6UXN7 152 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 LINC01560Q8TB33 94 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 TPSG1Q9NRR2 321 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 IL36BQ9NZH7 164 aa14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 RALYQ9UKM9 306 aaKnown RBP14.8□□□□□ -0.04
SEMA3B-209ENST00000456560 TRAV9-1A0A075B6T8 112 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 A0A1W2PRE2 83 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 CD33P20138 364 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 CBLN1P23435 193 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 ZNF841Q6ZN19 808 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 THAP8Q8NA92 274 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 TNFRSF14Q92956 283 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 SLC25A2Q9BXI2 301 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 DNAJC4Q9NNZ3 241 aa14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 SMG1Q96Q15 3661 aaKnown RBP14.79□□□□□ -0.04
SEMA3B-209ENST00000456560 IGKV1D-37A0A075B6S9 117 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 A0A1W2PPI3 338 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 HELTA6NFD8 242 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 GGTLC3B5MD39 225 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 SELENOTP62341 195 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 FBXL19-AS1Q494R0 122 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 MORN5Q5VZ52 161 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 LYNX1G3V0Z9 82 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 OR10J4P0C629 311 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 LYNX1P0DP58 116 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 ZNF25P17030 456 aaPredicted RBP14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 PVRIGQ6DKI7 326 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 Q6ZWC4 215 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 TEX45Q8NA69 505 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 NPIPB3Q92617 1050 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 MRPL18Q9H0U6 180 aaKnown RBP14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 TP53TG3Q9ULZ0 132 aa14.78□□□□□ -0.04
SEMA3B-209ENST00000456560 TRAV5A0A0B4J249 113 aa14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 FSTL3O95633 263 aa14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 IGLV1-47P01700 117 aa14.77□□□□□ -0.04
SEMA3B-209ENST00000456560 CRYGBP07316 175 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms