RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 PRRG2O14669 202 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 IFNA5P01569 189 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 APOHP02749 345 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 CLRN1P58418 232 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 MALLQ13021 153 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SLC25A53Q5H9E4 307 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF776Q68DI1 518 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 BCL6BQ8N143 479 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SLC25A45Q8N413 288 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SCGB1C1Q8TD33 95 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM216AQ8WUB2 273 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 TNFRSF14Q92956 283 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SPSB4Q96A44 273 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SPAG8Q99932 426 aaPredicted RBP3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 GNB1LQ9BYB4 327 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 SCRT2Q9NQ03 307 aa3.68□□□□□ -1.82
DEPDC1-202ENST00000456315 FCN3O75636 299 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 CER1O95813 267 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 HLA-DRB1P01911 266 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SRFP11831 508 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 CCNOP22674 350 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 GCHFRP30047 84 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 CFHR2P36980 270 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 B3GALT5-AS1P59052 145 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 RPL19P84098 196 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SPRNQ5BIV9 151 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 DUX4L9Q6RFH8 374 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 ABHD17AQ96GS6 310 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 ULBP2Q9BZM5 246 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SH2D2AQ9NP31 389 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PINLYPA6NC86 204 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 NKX2-8O15522 239 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 CCDC144NLQ6NUI1 221 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 DNM1P34Q6PK57 102 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 LCNL1Q6ZST4 164 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 WDR5BQ86VZ2 330 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SIGMAR1Q99720 223 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PLSCR4Q9NRQ2 329 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 ANK3Q12955 4377 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 A0A1W2PRE2 83 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 HSBP1O75506 76 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 RANP62826 216 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 WDR82Q6UXN9 313 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 NFE4Q86UQ8 179 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PTH2Q96A98 100 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 IGF2BP2-AS1Q96M15 143 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 OXGR1Q96P68 337 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PSMG3-AS1Q96PY0 264 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 FZR1Q9UM11 496 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 FLNAP21333 2647 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 ATRQ13535 2644 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM166BA8MTA8 275 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 CDIPTO14735 213 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SS18L1O75177 396 aaPredicted RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 ERVK11-1P61568 191 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PAX2Q02962 417 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SMIM21Q3B7S5 101 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 WFDC3Q8IUB2 231 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 H1FXQ92522 213 aaKnown RBP3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 RAB1CQ92928 201 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SPIN2AQ99865 258 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 SPIN2BQ9BPZ2 258 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 MLST8Q9BVC4 326 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 RNF208Q9H0X6 261 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 PRO3102Q9H379 93 aa3.67□□□□□ -1.82
DEPDC1-202ENST00000456315 HIGD1CA8MV81 97 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 H0Y8G0 127 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 ACP1P24666 158 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 ZNF766Q5HY98 468 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 CXorf67Q86X51 503 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 C11orf53Q8IXP5 236 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 SCCPDHQ8NBX0 429 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 LSM10Q969L4 123 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 CGB1A6NKQ9 187 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 ECI1P42126 302 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 DLX1P56177 255 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 RHOBP62745 196 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 AESQ08117 197 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 RNFT1Q5M7Z0 435 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 YRDCQ86U90 279 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 CDIP1Q9H305 208 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 TSSC4Q9Y5U2 329 aaPredicted RBP3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 IGHV1OR21-1A0A087WYE8 117 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 CXCL13O43927 109 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM87AP0C7U9 286 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 FBLP22087 321 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 GRB2P62993 217 aaKnown RBP3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 GNG5P63218 68 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 PAX8Q06710 450 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 RAB31Q13636 194 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 TMEM249Q2WGJ8 235 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 C10orf55Q5SWW7 151 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 STXBP6Q8NFX7 210 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 OR10W1Q8NGF6 305 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 SLC25A40Q8TBP6 338 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 FAM234AQ9H0X4 552 aa3.66□□□□□ -1.82
DEPDC1-202ENST00000456315 HHLA3Q9XRX5 114 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms