RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 BSXQ3C1V8 233 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 TMEM268Q5VZI3 342 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 SELENOHQ8IZQ5 122 aaKnown RBP13.32□□□□□ -0.28
MSH6-207ENST00000456246 LHFPL5Q8TAF8 219 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 RETNQ9HD89 108 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 MCUBQ9NWR8 336 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 DNAH7Q8WXX0 4024 aa13.32□□□□□ -0.28
MSH6-207ENST00000456246 RPS10-NUDT3A0A1W2PQS6 291 aa13.31□□□□□ -0.28
MSH6-207ENST00000456246 Q6ZRM9 215 aa13.31□□□□□ -0.28
MSH6-207ENST00000456246 DEDD2Q8WXF8 326 aa13.31□□□□□ -0.28
MSH6-207ENST00000456246 ZNF414Q96IQ9 312 aa13.31□□□□□ -0.28
MSH6-207ENST00000456246 CACNG5Q9UF02 275 aa13.31□□□□□ -0.28
MSH6-207ENST00000456246 UBE2CO00762 179 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 CLN5O75503 358 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 TMEM50AO95807 157 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 ANXA3P12429 323 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 SRPXP78539 464 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 ODF3L2Q3SX64 289 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 TOMM20LQ6UXN7 152 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 NOXA1Q86UR1 476 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 OR4X1Q8NH49 305 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 RNF2Q99496 336 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
MSH6-207ENST00000456246 TRAV30A0A087WSZ9 112 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 KIR2DL5BA0A0G2JN68 375 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 KIR2DL5BA0A0G2JPC4 375 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 CCDC160A6NGH7 325 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 SULT1A3P0DMM9 295 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 SULT1A4P0DMN0 295 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 S100A5P33763 92 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 PAFAH1B2P68402 229 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 ZFAND6Q6FIF0 208 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 KIR2DL5AQ8N109 375 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 KIR2DL5BQ8NHK3 375 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 RNASEH2CQ8TDP1 164 aaKnown RBP13.29□□□□□ -0.28
MSH6-207ENST00000456246 GPR146Q96CH1 333 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 HEYLQ9NQ87 328 aaPredicted RBP13.29□□□□□ -0.28
MSH6-207ENST00000456246 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
MSH6-207ENST00000456246 PUS1Q9Y606 427 aaKnown RBP eCLIP13.29□□□□□ -0.28
MSH6-207ENST00000456246 A0A0B4J2A0 478 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 CEBPZOSA8MTT3 80 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 TMEM187Q14656 261 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 C2orf83Q53S99 150 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 Q6ZWC4 215 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 SLC24A4Q8NFF2 622 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 TMEM230Q96A57 120 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 FNDC4Q9H6D8 234 aaPredicted RBP13.28□□□□□ -0.28
MSH6-207ENST00000456246 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 SHPKQ9UHJ6 478 aa13.28□□□□□ -0.28
MSH6-207ENST00000456246 A0A1W2PS18 150 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 ZNF701M0R085 212 aaPredicted RBP13.27□□□□□ -0.29
MSH6-207ENST00000456246 SLC25A4P12235 298 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 PYDC2Q56P42 97 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 ETFRF1Q6IPR1 90 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 LGI3Q8N145 548 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 TOMM5Q8N4H5 51 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 TRIM63Q969Q1 353 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 ZFAND3Q9H8U3 227 aa13.27□□□□□ -0.29
MSH6-207ENST00000456246 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 AKR1C4P17516 323 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 CCR6P51684 374 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 KLF9Q13886 244 aaPredicted RBP13.26□□□□□ -0.29
MSH6-207ENST00000456246 NMSQ5H8A3 153 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 TCF24Q7RTU0 167 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 NARS2Q96I59 477 aaKnown RBP13.26□□□□□ -0.29
MSH6-207ENST00000456246 OVOL2Q9BRP0 275 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 V9GYH0 126 aa13.26□□□□□ -0.29
MSH6-207ENST00000456246 IGHV3-49A0A0A0MS15 119 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 DUXBA0A1W2PPF3 345 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 NPPCP23582 126 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 NPY1RP25929 384 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
MSH6-207ENST00000456246 SMCO1Q147U7 214 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 OR1S2Q8NGQ3 325 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 ST8SIA2Q92186 375 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 METTL26Q96S19 204 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 SLC25A21Q9BQT8 299 aaPredicted RBP13.25□□□□□ -0.29
MSH6-207ENST00000456246 RYR3Q15413 4870 aa13.25□□□□□ -0.29
MSH6-207ENST00000456246 LCE6AA0A183 80 aa13.24□□□□□ -0.29
MSH6-207ENST00000456246 A0A1B0GU03 582 aa13.24□□□□□ -0.29
MSH6-207ENST00000456246 ATP5IP56385 69 aaPredicted RBP13.24□□□□□ -0.29
MSH6-207ENST00000456246 TNFRSF9Q07011 255 aa13.24□□□□□ -0.29
MSH6-207ENST00000456246 TMEM128Q5BJH2 165 aa13.24□□□□□ -0.29
MSH6-207ENST00000456246 MRPL36Q9P0J6 103 aaKnown RBP13.24□□□□□ -0.29
MSH6-207ENST00000456246 HSPB7Q9UBY9 170 aa13.24□□□□□ -0.29
MSH6-207ENST00000456246 U3KQ87 197 aa13.24□□□□□ -0.29
MSH6-207ENST00000456246 IGHV3OR16-13A0A075B7E8 117 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 IGHV3-74A0A0B4J1X5 117 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 SPRY2O43597 315 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 DFFBO76075 338 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 IGKV1-17P01599 117 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 TFPI2P48307 235 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 ZNF79Q15937 498 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 SPANXN2Q5MJ10 180 aa13.23□□□□□ -0.29
MSH6-207ENST00000456246 RBM38Q9H0Z9 239 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms