RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 ZNF83P51522 516 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 RPS16P62249 146 aaKnown RBP8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 UBE2V1Q13404 147 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 BATFQ16520 125 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SPINK9Q5DT21 86 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 FAM214BQ7L5A3 538 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ATP5L2Q7Z4Y8 100 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GCSAMQ8N6F7 178 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ZNF439Q8NDP4 499 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ZNF738Q8NE65 137 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 C1orf162Q8NEQ5 155 aaPredicted RBP8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 OR13A1Q8NGR1 328 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 TSKUQ8WUA8 353 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 TMEM190Q8WZ59 177 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 MBD6Q96DN6 1003 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 C1orf159Q96HA4 380 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IGF2BP2-AS1Q96M15 143 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 DOCK7Q96N67 2140 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SAP30LQ9HAJ7 183 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ZNF331Q9NQX6 463 aaPredicted RBP8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 TMEM14BQ9NUH8 114 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ZNF257Q9Y2Q1 563 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 COX11Q9Y6N1 276 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 MAST4O15021 2626 aa8.19□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PKDREJQ9NTG1 2253 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 A0A1W2PN81 502 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 F2Z2F3 143 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 M0R1X1 148 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 MGST3O14880 152 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 CGAP01215 116 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IGLV2-8P01709 118 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GRPP07492 148 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 TSPOP30536 169 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SRIP30626 198 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 CDKN1BP46527 198 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 REG1BP48304 166 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 CEBPDP49716 269 aaPredicted RBP8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GUSBP1Q15486 140 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IBA57Q5T440 356 aaKnown RBP8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 WDR82Q6UXN9 313 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 STPG4Q8N801 248 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 OR8B3Q8NGG8 313 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 LINC01560Q8TB33 94 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 Q8TCH9 128 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 C22orf15Q8WYQ4 148 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GRAMD2BQ96HH9 432 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 OR8B2Q96RD0 313 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 OBP2BQ9NPH6 170 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PRNDQ9UKY0 176 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PROCRQ9UNN8 238 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 RNF114Q9Y508 228 aa8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
CHCHD4P3-201ENST00000455954 INTS1Q8N201 2190 aaKnown RBP8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GOSR1O95249 250 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 C8orf88P0DMB2 117 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PMCHP20382 165 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 HNF1AP20823 631 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 USF1P22415 310 aaPredicted RBP8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SSTR5P35346 364 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 CFHR2P36980 270 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PTTG1IPP53801 180 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 FAM27E3Q08E93 113 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PSG5Q15238 335 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 MMDQ15546 238 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SPATA31B1PQ5VZV4 182 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ZNF474Q6S9Z5 364 aaPredicted RBP8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SSMEM1Q8WWF3 244 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 NABP2Q9BQ15 211 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 FAM103A1Q9BTL3 118 aaKnown RBP8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IFI27L2Q9H2X8 130 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GSX1Q9H4S2 264 aaPredicted RBP8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PLEKHA3Q9HB20 300 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ST20Q9HBF5 79 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PLSCR4Q9NRQ2 329 aa8.17□□□□□ -1.1
CHCHD4P3-201ENST00000455954 TRAV30A0A087WSZ9 112 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IGHV2-70DA0A0C4DH43 119 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IGLC7A0M8Q6 106 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 INS-IGF2F8WCM5 200 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 H0YJW9 148 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PROP1O75360 226 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 CD33P20138 364 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 CRYBB3P26998 211 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 UBE2G1P62253 170 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PRCDQ00LT1 54 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 NOTCH2Q04721 2471 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 COTL1Q14019 142 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 C2orf83Q53S99 150 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 PET117Q6UWS5 81 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 MIR17HGQ75NE6 70 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ABHD12Q8N2K0 398 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 MUC15Q8N387 334 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 OR1L8Q8NGR8 309 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 KLF14Q8TD94 323 aaPredicted RBP8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 ZNF714Q96N38 554 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 GNG12Q9UBI6 72 aa8.16□□□□□ -1.1
CHCHD4P3-201ENST00000455954 TANC2Q9HCD6 1990 aa8.15□□□□□ -1.1
CHCHD4P3-201ENST00000455954 NBPF19A0A087WUL8 3843 aa8.15□□□□□ -1.1
CHCHD4P3-201ENST00000455954 IGHV2OR16-5A0A0B4J2B6 119 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms