RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ZNF431Q8TF32 576 aaPredicted RBP8.64□□□□□ -1.03
HERC3-207ENST00000452979 MITD1Q8WV92 249 aa8.64□□□□□ -1.03
HERC3-207ENST00000452979 RBPMSQ93062 196 aaKnown RBP8.64□□□□□ -1.03
HERC3-207ENST00000452979 ZNF436Q9C0F3 470 aaPredicted RBP8.64□□□□□ -1.03
HERC3-207ENST00000452979 TMEM140Q9NV12 185 aa8.64□□□□□ -1.03
HERC3-207ENST00000452979 UFC1Q9Y3C8 167 aa8.64□□□□□ -1.03
HERC3-207ENST00000452979 DNAH6Q9C0G6 4158 aa8.64□□□□□ -1.03
HERC3-207ENST00000452979 C7orf66A4D0T2 115 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 TSPAN4O14817 238 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 HRASP01112 189 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 NQO2P16083 231 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 HLA-GP17693 338 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 RPL8P62917 257 aaKnown RBP8.63□□□□□ -1.03
HERC3-207ENST00000452979 DEFB135Q30KP9 77 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 LYZL2Q7Z4W2 148 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 LGI3Q8N145 548 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 STPG3Q8N7X2 389 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 ZNF502Q8TBZ5 544 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 IL22RA2Q969J5 263 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 KCNIP3Q9Y2W7 256 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 ALG5Q9Y673 324 aa8.63□□□□□ -1.03
HERC3-207ENST00000452979 MFSD2BA6NFX1 497 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 DBX1A6NMT0 343 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 MPTX1A8MV57 137 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 PRAF2O60831 178 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 DEFA4P12838 97 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 MYOD1P15172 320 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 AKR1C2P52895 323 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 OR2B8PP59922 312 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 SRPXP78539 464 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 DMBX1Q8NFW5 382 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 OR4A5Q8NH83 315 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
HERC3-207ENST00000452979 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 BET1LQ9NYM9 111 aa8.62□□□□□ -1.03
HERC3-207ENST00000452979 A0A0B4J2A0 478 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 SNRPGP15A8MWD9 76 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 UPK2O00526 184 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 DEDDO75618 318 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 ADAP1O75689 374 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 REG1AP05451 166 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 GPR183P32249 361 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 ERVK-16P61578 105 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 ODF3L2Q3SX64 289 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 LAMTOR1Q6IAA8 161 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 Q6ZRM9 215 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 COQ8AQ8NI60 647 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 GPR146Q96CH1 333 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 SRSF8Q9BRL6 282 aaKnown RBP8.61□□□□□ -1.03
HERC3-207ENST00000452979 AIFM2Q9BRQ8 373 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 THYN1Q9P016 225 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 UBQLN2Q9UHD9 624 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 SHPKQ9UHJ6 478 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 NSG2Q9Y328 171 aa8.61□□□□□ -1.03
HERC3-207ENST00000452979 KIAA1109Q2LD37 5005 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 DUXBA0A1W2PPF3 345 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 IGLC7A0M8Q6 106 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 CCSO14618 274 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 TGOLN2O43493 480 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 FGF2P09038 288 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 HOXB5P09067 269 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 GGNBP1Q5YKI7 109 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 H2BFWTQ7Z2G1 175 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 CADM3Q8N126 398 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 C12orf45Q8N5I9 185 aaPredicted RBP8.6□□□□□ -1.03
HERC3-207ENST00000452979 RNASE11Q8TAA1 199 aaKnown RBP8.6□□□□□ -1.03
HERC3-207ENST00000452979 VN1R17PQ8TDU5 208 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 LSM10Q969L4 123 aaKnown RBP8.6□□□□□ -1.03
HERC3-207ENST00000452979 GPN1Q9HCN4 374 aaPredicted RBP8.6□□□□□ -1.03
HERC3-207ENST00000452979 CACNG5Q9UF02 275 aa8.6□□□□□ -1.03
HERC3-207ENST00000452979 IGHV3-35A0A0C4DH35 117 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 C15orf61A6NNL5 157 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 K7EMT4 169 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 FAM219AQ8IW50 185 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 RRNAD1Q96FB5 475 aaKnown RBP8.59□□□□□ -1.03
HERC3-207ENST00000452979 ATP6V0BQ99437 205 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 QTRT1Q9BXR0 403 aaKnown RBP8.59□□□□□ -1.03
HERC3-207ENST00000452979 DAZ1Q9NQZ3 744 aaKnown RBP8.59□□□□□ -1.03
HERC3-207ENST00000452979 TMEM14BQ9NUH8 114 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 TMED3Q9Y3Q3 217 aa8.59□□□□□ -1.03
HERC3-207ENST00000452979 OR4C46A6NHA9 309 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 NDUFA4O00483 81 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 ATG12O94817 140 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
HERC3-207ENST00000452979 TCTAP57738 103 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 AARDQ4LEZ3 155 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 SPSB3Q6PJ21 355 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 Q6ZNX1 250 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 GATAD1Q8WUU5 269 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 BSCL2Q96G97 398 aaPredicted RBP8.58□□□□□ -1.04
HERC3-207ENST00000452979 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
HERC3-207ENST00000452979 GOSR2O14653 212 aa8.57□□□□□ -1.04
HERC3-207ENST00000452979 CYB5BO43169 146 aa8.57□□□□□ -1.04
HERC3-207ENST00000452979 ST8SIA3O43173 380 aa8.57□□□□□ -1.04
HERC3-207ENST00000452979 SSNA1O43805 119 aa8.57□□□□□ -1.04
HERC3-207ENST00000452979 PITX3O75364 302 aa8.57□□□□□ -1.04
HERC3-207ENST00000452979 NXPH3O95157 252 aa8.57□□□□□ -1.04
HERC3-207ENST00000452979 SULT1A3P0DMM9 295 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms