RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
VTA1-203ENST00000452973 C8orf46Q8TAG6 207 aa9.44□□□□□ -0.9
VTA1-203ENST00000452973 CACNG8Q8WXS5 425 aa9.44□□□□□ -0.9
VTA1-203ENST00000452973 LPAR2Q9HBW0 351 aa9.44□□□□□ -0.9
VTA1-203ENST00000452973 DPM3Q9P2X0 92 aa9.44□□□□□ -0.9
VTA1-203ENST00000452973 A0A0U1RQK1 487 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 FNDC10F2Z333 226 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 MFAP2P55001 183 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 ATP5IP56385 69 aaPredicted RBP9.43□□□□□ -0.9
VTA1-203ENST00000452973 TPTE2P1Q5T6R2 138 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 DTX2Q86UW9 622 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 UTP20O75691 2785 aaKnown RBP9.43□□□□□ -0.9
VTA1-203ENST00000452973 A0A1W2PPQ1 181 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 ORM2P19652 201 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 OR4X1Q8NH49 305 aa9.43□□□□□ -0.9
VTA1-203ENST00000452973 TRBV20OR9-2A0A075B6H5 130 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 COX7A2P2O60397 106 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 CLN5O75503 358 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 FSTL3O95633 263 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
VTA1-203ENST00000452973 GALR1P47211 349 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 COMPP49747 757 aaPredicted RBP9.42□□□□□ -0.9
VTA1-203ENST00000452973 RNASEH2CQ8TDP1 164 aaKnown RBP9.42□□□□□ -0.9
VTA1-203ENST00000452973 SRSF12Q8WXF0 261 aaKnown RBP9.42□□□□□ -0.9
VTA1-203ENST00000452973 OR5B12Q96R08 314 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 TECRQ9NZ01 308 aaKnown RBP9.42□□□□□ -0.9
VTA1-203ENST00000452973 CRYBG3Q68DQ2 2970 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 VENTXO95231 258 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 RBP4P02753 201 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 NDUFA6P56556 154 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 FBLN7Q53RD9 439 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 VMO1Q7Z5L0 202 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 DNAJC4Q9NNZ3 241 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 USP9XQ93008 2570 aaPredicted RBP9.42□□□□□ -0.9
VTA1-203ENST00000452973 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
VTA1-203ENST00000452973 C5orf52A6NGY3 159 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 F6UZH7 168 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 LY6LH3BQJ8 138 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 PYYP10082 97 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 CRYBB3P26998 211 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
VTA1-203ENST00000452973 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
VTA1-203ENST00000452973 TMEM249Q2WGJ8 235 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 OR1B1Q8NGR6 318 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 MALSU1Q96EH3 234 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 ZNF503Q96F45 646 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 CTDSP1Q9GZU7 261 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 NCBP2LA6PVI3 153 aaKnown RBP9.41□□□□□ -0.9
VTA1-203ENST00000452973 CRYGBP07316 175 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 S100PP25815 95 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 MAS1LP35410 378 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 OR5AU1Q8NGC0 362 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 BPESC1Q9GZL8 116 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 TNFRSF19Q9NS68 423 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 S4R3C0 116 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 VPS13CQ709C8 3753 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 CELSR1Q9NYQ6 3014 aa9.41□□□□□ -0.9
VTA1-203ENST00000452973 IGKV1D-37A0A075B6S9 117 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 TCRBV4S1A1TA0A5B7 111 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 PRTN3P24158 256 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 CEACAM3P40198 252 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 TAS2R45P59539 299 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 C10orf113Q5VZT2 155 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 MRPL41Q8IXM3 137 aaKnown RBP9.4□□□□□ -0.9
VTA1-203ENST00000452973 ZNF355PQ9NSJ1 428 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 INS-IGF2F8WCM5 200 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 UBE2L3P68036 154 aaKnown RBP9.4□□□□□ -0.9
VTA1-203ENST00000452973 PDZD11Q5EBL8 140 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 KLF17Q5JT82 389 aaPredicted RBP9.4□□□□□ -0.9
VTA1-203ENST00000452973 LINC00518Q8N0U6 118 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 DYNAPQ8N1N2 210 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 OR11H6Q8NGC7 330 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 OCC1Q8TAD7 63 aa9.4□□□□□ -0.9
VTA1-203ENST00000452973 TEX22C9J3V5 150 aa9.4□□□□□ -0.91
VTA1-203ENST00000452973 FAM208BQ5VWN6 2430 aa9.4□□□□□ -0.91
VTA1-203ENST00000452973 AP4M1O00189 453 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 EFNA4P52798 201 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 PATE2Q6UY27 113 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 PQLC2Q6ZP29 291 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 C22orf15Q8WYQ4 148 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 TMEM167BQ9NRX6 74 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 CENPEQ02224 2701 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 A6NNC1 897 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 M0R1W7 72 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 NBR2O15453 112 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 LEMD1Q68G75 181 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 LINC00305Q7Z4B0 112 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 FRZBQ92765 325 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 EAF1Q96JC9 268 aaPredicted RBP9.39□□□□□ -0.91
VTA1-203ENST00000452973 C12orf57Q99622 126 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 SLC25A2Q9BXI2 301 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 WNT10AQ9GZT5 417 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 DMRT1Q9Y5R6 373 aa9.39□□□□□ -0.91
VTA1-203ENST00000452973 MDFIC2A0A1B0GVS7 189 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BKO60814 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BJP06899 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 PFN1P07737 140 aaKnown RBP9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BOP23527 126 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms