RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 STEAP1BQ6NZ63 245 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 FAM219AQ8IW50 185 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 STHQ8IWL8 128 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 OR13C8Q8NGS7 320 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 TMEM230Q96A57 120 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 GRAMD2BQ96HH9 432 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 MS4A6AQ9H2W1 248 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 VSIRQ9H7M9 311 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 PLECQ15149 4684 aaKnown RBP8.68□□□□□ -1.02
TTC28-203ENST00000442232 EPPK1P58107 5090 aaKnown RBP8.68□□□□□ -1.02
TTC28-203ENST00000442232 BIRC6Q9NR09 4857 aa8.68□□□□□ -1.02
TTC28-203ENST00000442232 TEX13DA0A0J9YY54 714 aaPredicted RBP8.67□□□□□ -1.02
TTC28-203ENST00000442232 DISC1C4P0D8 188 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 GABARAPH6UMI1 98 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 CLN5O75503 358 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 TMEM50AO95807 157 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 IFNA4P05014 189 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 P0C879 139 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 RNASE2P10153 161 aaKnown RBP8.67□□□□□ -1.02
TTC28-203ENST00000442232 UCP1P25874 307 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 ETV6P41212 452 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 DEFB131AP59861 70 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 SSBP1Q04837 148 aaKnown RBP8.67□□□□□ -1.02
TTC28-203ENST00000442232 TMEM187Q14656 261 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 SP6Q3SY56 376 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 FAM90A2PQ658T7 463 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 STXBP6Q8NFX7 210 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 OR11H2Q8NH07 326 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 MARCH1Q8TCQ1 289 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 PHLDA1Q8WV24 401 aaPredicted RBP8.67□□□□□ -1.02
TTC28-203ENST00000442232 NAA50Q9GZZ1 169 aaKnown RBP8.67□□□□□ -1.02
TTC28-203ENST00000442232 C11orf68Q9H3H3 251 aaKnown RBP8.67□□□□□ -1.02
TTC28-203ENST00000442232 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
TTC28-203ENST00000442232 TRAV30A0A087WSZ9 112 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 CD74P04233 296 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 OR5AC1P0C628 307 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 HTR2BP41595 481 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 RPL5P46777 297 aaKnown RBP8.66□□□□□ -1.02
TTC28-203ENST00000442232 SPCS3P61009 180 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 DHODHQ02127 395 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 RBMS2Q15434 407 aaKnown RBP8.66□□□□□ -1.02
TTC28-203ENST00000442232 CTF1Q16619 201 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 GPR141Q7Z602 305 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 CENPSQ8N2Z9 138 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 OR4D10Q8NGI6 311 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 OR4X1Q8NH49 305 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 C11orf45Q8TAV5 145 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 ZNF414Q96IQ9 312 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 ABHD1Q96SE0 405 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 TMEM222Q9H0R3 208 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 HEYLQ9NQ87 328 aaPredicted RBP8.66□□□□□ -1.02
TTC28-203ENST00000442232 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
TTC28-203ENST00000442232 FBXL17Q9UF56 701 aa8.66□□□□□ -1.02
TTC28-203ENST00000442232 A0A1B0GU03 582 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 CEBPZOSA8MTT3 80 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 APOHP02749 345 aaPredicted RBP8.65□□□□□ -1.02
TTC28-203ENST00000442232 P2RY1P47900 373 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 IL18Q14116 193 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 SURF2Q15527 256 aaPredicted RBP8.65□□□□□ -1.02
TTC28-203ENST00000442232 TMEM41BQ5BJD5 291 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 LEMD1Q68G75 181 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 ETFRF1Q6IPR1 90 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 NOXA1Q86UR1 476 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 OR52E5Q8NH55 327 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 RBPMSQ93062 196 aaKnown RBP8.65□□□□□ -1.02
TTC28-203ENST00000442232 MRPS26Q9BYN8 205 aaKnown RBP8.65□□□□□ -1.02
TTC28-203ENST00000442232 NAA60Q9H7X0 242 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 RABL2AQ9UBK7 228 aaPredicted RBP8.65□□□□□ -1.02
TTC28-203ENST00000442232 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 RABL2BQ9UNT1 228 aa8.65□□□□□ -1.02
TTC28-203ENST00000442232 HELTA6NFD8 242 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 AKAIN1P0CW23 69 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 SLC25A4P12235 298 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 NANOS2P60321 138 aaKnown RBP8.64□□□□□ -1.03
TTC28-203ENST00000442232 TIGITQ495A1 244 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 TMEM268Q5VZI3 342 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 PVRIGQ6DKI7 326 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 FAAP20Q6NZ36 180 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 OR1S2Q8NGQ3 325 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 RNASEH2CQ8TDP1 164 aaKnown RBP8.64□□□□□ -1.03
TTC28-203ENST00000442232 Q8WTZ3 238 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 SMIM4Q8WVI0 70 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 PRRT1Q99946 306 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 FNDC4Q9H6D8 234 aaPredicted RBP8.64□□□□□ -1.03
TTC28-203ENST00000442232 CACNG5Q9UF02 275 aa8.64□□□□□ -1.03
TTC28-203ENST00000442232 A0A0G2JRQ6 117 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 NOL3O60936 208 aaKnown RBP8.63□□□□□ -1.03
TTC28-203ENST00000442232 CDS2O95674 445 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 HNRNPCP07910 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
TTC28-203ENST00000442232 ZNF688P0C7X2 276 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 SMIM18P0DKX4 95 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 SPP1P10451 314 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 CRYBB3P26998 211 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 BSXQ3C1V8 233 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 MORN3Q6PF18 240 aaPredicted RBP8.63□□□□□ -1.03
TTC28-203ENST00000442232 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 SLC24A4Q8NFF2 622 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 DIRAS2Q96HU8 199 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 SCGB3A2Q96PL1 93 aa8.63□□□□□ -1.03
TTC28-203ENST00000442232 MIXL1Q9H2W2 232 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms