RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 TMEM14BQ9NUH8 114 aa10.68□□□□□ -0.7
SLC48A1-201ENST00000442218 HRNRQ86YZ3 2850 aaPredicted RBP10.68□□□□□ -0.7
SLC48A1-201ENST00000442218 DIRC3C9JPN6 131 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 ORM2P19652 201 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 RITA1Q96K30 269 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 ENSAO43768 121 aaKnown RBP10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 IGLV1-44P01699 117 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 YPEL3P61236 119 aaPredicted RBP10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 PRR20EP86478 221 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 PRR20CP86479 221 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 PRR20DP86480 221 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 PRR20BP86481 221 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 PRR20AP86496 221 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 SLAQ13239 276 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 CCL17Q92583 94 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 NPIPB3Q92617 1050 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 NRN1Q9NPD7 142 aa10.67□□□□□ -0.7
SLC48A1-201ENST00000442218 H0Y8G0 127 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 CD99P14209 185 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 MBNL2Q5VZF2 373 aaKnown RBP10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 WFDC8Q8IUA0 241 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 ST6GALNAC6Q969X2 333 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 SLC45A2Q9UMX9 530 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 A0A1W2PRD5 423 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 A0A1W2PRF3 423 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 A0A1W2PRM7 423 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 F2RL2O00254 374 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 IGHV1-46P01743 117 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 STUMQ69YW2 141 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 BEND2Q8NDZ0 799 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 PLSCR4Q9NRQ2 329 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 IL19Q9UHD0 177 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 MT-CO2P00403 227 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 MFAP2P55001 183 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 FOXA3P55318 350 aaPredicted RBP10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 DNLZQ5SXM8 178 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 TCTEX1D1Q8N7M0 179 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 RBMXL3Q8N7X1 1067 aaKnown RBP10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 OR52E5Q8NH55 327 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 TMEM68Q96MH6 324 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 GAFA1Q96PS6 74 aa10.66□□□□□ -0.7
SLC48A1-201ENST00000442218 KIR2DL5BA0A0G2JN68 375 aa10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 KIR2DL5BA0A0G2JPC4 375 aa10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 COMPP49747 757 aaPredicted RBP10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 RPL8P62917 257 aaKnown RBP10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 KIR2DL5AQ8N109 375 aa10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 COMMD5Q9GZQ3 224 aa10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 RNF7Q9UBF6 113 aa10.65□□□□□ -0.7
SLC48A1-201ENST00000442218 BMPR1BO00238 502 aa10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 RAB4AP20338 218 aa10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 USF1P22415 310 aaPredicted RBP10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 PRR30Q53SZ7 412 aaPredicted RBP10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 IGFL3Q6UXB1 125 aa10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 NEUROG1Q92886 237 aa10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 FNDC4Q9H6D8 234 aaPredicted RBP10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 CDC42EP3Q9UKI2 254 aa10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 FOXA2Q9Y261 457 aaPredicted RBP10.65□□□□□ -0.71
SLC48A1-201ENST00000442218 A0A1W2PS18 150 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 ISLRO14498 428 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF137PP52743 207 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 TMEM136Q6ZRR5 245 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 TECRQ9NZ01 308 aaKnown RBP10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 UPK2O00526 184 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC25A17O43808 307 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 IGLV2-8P01709 118 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 GPX1P07203 203 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 Q6ZS92 163 aa10.64□□□□□ -0.71
SLC48A1-201ENST00000442218 RNASE2P10153 161 aaKnown RBP10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 TMPRSS3P57727 454 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 Q56UQ5 140 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 RNASEKQ6P5S7 137 aaKnown RBP10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 LYPD2Q6UXB3 125 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 TCF24Q7RTU0 167 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 SAP30LQ9HAJ7 183 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 CSMD2Q7Z408 3487 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 COX7A2P2O60397 106 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 FCN3O75636 299 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 CGB3P0DN86 165 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 CGB7P0DN87 165 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 RAB7AP51149 207 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 TMEM183BQ1AE95 376 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 GDF5OSQ5U4N7 250 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF439Q8NDP4 499 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 TXN2Q99757 166 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 C3orf79P0CE67 100 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 AREGP15514 252 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 CNTFRP26992 372 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 TCTAP57738 103 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 PRCDQ00LT1 54 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 WT1-ASQ06250 92 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 RTL8BQ17RB0 113 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 SPACA3Q8IXA5 215 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 OR1B1Q8NGR6 318 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 OR10X1Q8NGY0 326 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC25A33Q9BSK2 321 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms