RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 Q8TCH9 128 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 FAM168AQ92567 244 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 SMIM12Q96EX1 92 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 ZNF503Q96F45 646 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 OR2V2Q96R30 315 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 MED12LQ86YW9 2145 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 IGHV3-43A0A0B4J1X8 118 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 TRAV17A0A0B4J275 112 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 A0A1W2PRE2 83 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 GGTLC3B5MD39 225 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 CD5LO43866 347 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 CA1P00915 261 aaPredicted RBP9.73□□□□□ -0.85
LTBR-203ENST00000441074 IGHV3-43DP0DP04 118 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 IGFBP2P18065 325 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 CA7P43166 264 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 RPL8P62917 257 aaKnown RBP9.73□□□□□ -0.85
LTBR-203ENST00000441074 FAM71F2Q6NXP2 309 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 FAM231DQ6ZW35 169 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 RPRMLQ8N4K4 120 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 ST6GALNAC6Q969X2 333 aa9.73□□□□□ -0.85
LTBR-203ENST00000441074 ATRXP46100 2492 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 DEFB108AA8MXU0 73 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 PROP1O75360 226 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 GPR12P47775 334 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 TRAT1Q6PIZ9 186 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 CNEP1R1Q8N9A8 125 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 NABP2Q9BQ15 211 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 PLEKHA3Q9HB20 300 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 GCM1Q9NP62 436 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 ZNF71Q9NQZ8 489 aaPredicted RBP9.72□□□□□ -0.85
LTBR-203ENST00000441074 MUC21A0A0G2JKD1 596 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 MUC21A0A140T8X8 626 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 GAGE12BA1L429 117 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 AHRRA9YTQ3 701 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 CEACAM4O75871 244 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 GRPP07492 148 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 ADH4P08319 380 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 CELA3BP08861 270 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 MUC21Q5SSG8 566 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 VWA1Q6PCB0 445 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 NUDT11Q96G61 164 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 SSBP3Q9BWW4 388 aaPredicted RBP9.72□□□□□ -0.85
LTBR-203ENST00000441074 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 CLCF1Q9UBD9 225 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 CHTOPQ9Y3Y2 248 aaKnown RBP9.72□□□□□ -0.85
LTBR-203ENST00000441074 SPTA1P02549 2419 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
LTBR-203ENST00000441074 PRR14LQ5THK1 2151 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 TMEM238C9JI98 176 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 LYZL6O75951 148 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 TAS2R45P59539 299 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 PSG9Q00887 426 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 FAM120AOSQ5T036 256 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 VKORC1L1Q8N0U8 176 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 ZADH2Q8N4Q0 377 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 NUP35Q8NFH5 326 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 OR13A1Q8NGR1 328 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 RFESDQ8TAC1 157 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 SLC25A40Q8TBP6 338 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 ABHD17AQ96GS6 310 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 URB1-AS1Q96HZ7 61 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 C19orf24Q9BVV8 132 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 TMEM140Q9NV12 185 aa9.71□□□□□ -0.85
LTBR-203ENST00000441074 IGHV3-64DA0A0J9YX35 117 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 SYS1-DBNDD2H3BUS1 97 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 SPINT2O43291 252 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 OR7C2O60412 319 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 HLA-DRB1P01911 266 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 Q6ZR03 302 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 RBMXL3Q8N7X1 1067 aaKnown RBP9.71□□□□□ -0.86
LTBR-203ENST00000441074 C9orf106Q8NAJ2 232 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 OR2T6Q8NHC8 308 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 SPOCK3Q9BQ16 436 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.86
LTBR-203ENST00000441074 GPR6P46095 362 aaPredicted RBP9.7□□□□□ -0.86
LTBR-203ENST00000441074 CHRDL1Q9BU40 450 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 CXXC4Q9H2H0 198 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 ZNF355PQ9NSJ1 428 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 hDV102S1A0JD36 115 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 C15orf61A6NNL5 157 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 HSBP1L1C9JCN9 74 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 C15orf65H3BRN8 121 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 WNT9BO14905 357 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 IGHG3P01860 377 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 GATA2P23769 480 aaPredicted RBP9.7□□□□□ -0.86
LTBR-203ENST00000441074 VHLLQ6RSH7 139 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 ACP7Q6ZNF0 438 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 ATP5L2Q7Z4Y8 100 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 TMEM191AQ9H0A3 160 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 OBP2BQ9NPH6 170 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 SCRT2Q9NQ03 307 aa9.7□□□□□ -0.86
LTBR-203ENST00000441074 PEF1Q9UBV8 284 aaKnown RBP9.7□□□□□ -0.86
LTBR-203ENST00000441074 KIR2DS2P43631 304 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 HSPE1P61604 102 aaKnown RBP9.69□□□□□ -0.86
LTBR-203ENST00000441074 SMIM21Q3B7S5 101 aa9.69□□□□□ -0.86
LTBR-203ENST00000441074 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms